RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SCD5Q86SK9 330 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 LRRC6Q86X45 466 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 PLCZ1Q86YW0 608 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 PRR22Q8IZ63 422 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 FBXL16Q8N461 479 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF461Q8TAF7 563 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 ENKURQ8TC29 256 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 GPR151Q8TDV0 419 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 SMARCD2Q92925 531 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 RPUSD4Q96CM3 377 aaKnown RBP3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 ALS2CR12Q96Q35 445 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 SORT1Q99523 831 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 P2RY13Q9BPV8 354 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 EBF4Q9BQW3 602 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 OR51M1Q9H341 326 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 RANBP3Q9H6Z4 567 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 CWH43Q9H720 699 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZDHHC11Q9H8X9 412 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 ADAP2Q9NPF8 381 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 RBAKQ9NYW8 714 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 CD274Q9NZQ7 290 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 PDP1Q9P0J1 537 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 CLEC4EQ9ULY5 219 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 DDX19BQ9UMR2 479 aa3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 PACSIN2Q9UNF0 486 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF256Q9Y2P7 627 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P10-201ENST00000395823 PHF3Q92576 2039 aaKnown RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 TRBV11-1A0A0K0K1C0 115 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 A0A1B0GUH1 482 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 TMEM120BA0PK00 339 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 EPOPA6NHQ4 379 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 RAB29O14966 203 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 ANXA5P08758 320 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 CLTAP09496 248 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 PSMB1P20618 241 aaKnown RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 IFNA8P32881 189 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 BTCP35070 178 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 NPBWR2P48146 333 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 RGS19P49795 217 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 GDI2P50395 445 aaKnown RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 DLX1P56177 255 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 TNNC1P63316 161 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 MRPS22P82650 360 aaKnown RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 LRRC63Q05C16 580 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 FADDQ13158 208 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 ITGB3BPQ13352 177 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 UAP1Q16222 522 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 SMUG1Q53HV7 270 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 VAX1Q5SQQ9 334 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 SLC25A30Q5SVS4 291 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 MFSD6LQ8IWD5 586 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 OR51S1Q8NGJ8 323 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 FAM122AQ96E09 287 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF578Q96N58 590 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 SMIM14Q96QK8 99 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 ATP5SQ99766 215 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 C9orf16Q9BUW7 83 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 BBS2Q9BXC9 721 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 SAV1Q9H4B6 383 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 PTTG3PQ9NZH4 202 aa3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 LSM7Q9UK45 103 aaKnown RBP3.61□□□□□ -1.83
HMGB1P10-201ENST00000395823 SMCO3A2RU48 225 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 C12orf77C9JDV5 145 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 GOLGA8MH3BSY2 632 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 CYTH3O43739 400 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 CHST1O43916 411 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 SNAPINO95295 136 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 NAMPTP43490 491 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 VDAC2P45880 294 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 RPS5P46782 204 aaKnown RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 TFPI2P48307 235 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 CSNK1EP49674 416 aaKnown RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 SKP1P63208 163 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 IGLV3-21P80748 117 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 XIAPP98170 497 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 KDSRQ06136 332 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 PDIA2Q13087 525 aaKnown RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF544Q6NX49 715 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 TMEM53Q6P2H8 277 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 TMIGD1Q6UXZ0 262 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF620Q6ZNG0 422 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 COPS6Q7L5N1 327 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 PLA2G4DQ86XP0 818 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 PQLC3Q8N755 202 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF557Q8N988 423 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 GATSQ8NAP1 163 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 FBXL13Q8NEE6 735 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 OR13C9Q8NGT0 318 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 OR9G1Q8NH87 305 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 ACOT11Q8WXI4 607 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 PPP1R14BQ96C90 147 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 HSFY1Q96LI6 401 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 ZNF317Q96PQ6 595 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 TMEM246Q9BRR3 403 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 PELOQ9BRX2 385 aaKnown RBP3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 TMEM175Q9BSA9 504 aa3.6□□□□□ -1.83
HMGB1P10-201ENST00000395823 NICN1Q9BSH3 213 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms