RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CLVS2Q5SYC1 327 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 MFSD9Q8NBP5 474 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 FAM71F1Q96KD3 344 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-202ENST00000394820 CRB3Q9BUF7 120 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 SELENOIQ9C0D9 397 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 VSX1Q9NZR4 365 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-202ENST00000394820 DAPP1Q9UN19 280 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 PCDHGA9Q9Y5G4 932 aaKnown RBP12.05□□□□□ -0.48
NFKB1-202ENST00000394820 MDC1Q14676 2089 aaKnown RBP12.05□□□□□ -0.48
NFKB1-202ENST00000394820 KIF26BQ2KJY2 2108 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 SSX5O60225 188 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 PRAF2O60831 178 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 SERPINA5P05154 406 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 IFNGR1P15260 489 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 Q499Y3 187 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 KLHL24Q6TFL4 600 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 OR13H1Q8NG92 308 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 OR11G2Q8NGC1 345 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 ADAM29Q9UKF5 820 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 SLC17A4Q9Y2C5 497 aa12.05□□□□□ -0.48
NFKB1-202ENST00000394820 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
NFKB1-202ENST00000394820 A0A0A6YYH2 397 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 A6NJ64 397 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 C17orf51A8MQB3 221 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 CTSBP07858 339 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ITGA5P08648 1049 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 MMP15P51511 669 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 HNF4GQ14541 408 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF550Q7Z398 422 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ATOH1Q92858 354 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-202ENST00000394820 FAM3DQ96BQ1 224 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 FBXO17Q96EF6 278 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 PARPBPQ9NWS1 579 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 HEBP2Q9Y5Z4 205 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 D6RAR5 112 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 SUSD5O60279 629 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 SNRNP70P08621 437 aaKnown RBP12.04□□□□□ -0.48
NFKB1-202ENST00000394820 JMJD7P0C870 316 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 RAB6AP20340 208 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 SNU13P55769 128 aaKnown RBP12.04□□□□□ -0.48
NFKB1-202ENST00000394820 POU4F2Q12837 409 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 RPL13AP3Q6NVV1 102 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 OR13C9Q8NGT0 318 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 GPR119Q8TDV5 335 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 MRGPRX1Q96LB2 322 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 FAM96BQ9Y3D0 163 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 LRRK1Q38SD2 2015 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 KRBOX1C9JBD0 128 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 SGCEO43556 437 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 PLPP2O43688 288 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ZIC2O95409 532 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-202ENST00000394820 PMP2P02689 132 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 KIR2DL1P43626 348 aaPredicted RBP12.04□□□□□ -0.48
NFKB1-202ENST00000394820 GPR143P51810 404 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 FOXL2P58012 376 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ZP1P60852 638 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 HYAL1Q12794 435 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 C2orf68Q2NKX9 166 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 OR1J2Q8NGS2 313 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 SFXN5Q8TD22 340 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 C12orf57Q99622 126 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ZMIZ1Q9ULJ6 1067 aa12.04□□□□□ -0.48
NFKB1-202ENST00000394820 ICE1Q9Y2F5 2266 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 TRAV8-7A0A075B6U6 113 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 METTL21EPA6NDL7 271 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 CALCBP10092 127 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 PPT1P50897 306 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 NANOS3P60323 173 aaKnown RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 H3F3CQ6NXT2 135 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SLC35F3Q8IY50 421 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 INTS14Q96SY0 518 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 EMC6Q9BV81 110 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 EVA1AQ9H8M9 152 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SLCO1C1Q9NYB5 712 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 ZNF14P17017 642 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 NPY4RP50391 375 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 ALKBH1Q13686 389 aaKnown RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SLC22A6Q4U2R8 563 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SLC25A24Q6NUK1 477 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM71Q6P5X7 295 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM92Q6UXU6 159 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 SLC29A4Q7RTT9 530 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 RCBTB1Q8NDN9 531 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 TMEM52Q8NDY8 209 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 ZNRF4Q8WWF5 429 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 RSC1A1Q92681 617 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 BMFQ96LC9 184 aa12.03□□□□□ -0.48
NFKB1-202ENST00000394820 JSRP1Q96MG2 331 aaPredicted RBP12.03□□□□□ -0.48
NFKB1-202ENST00000394820 GPR137Q96N19 417 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms