RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RFPL4AL1F8VTS6 287 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 P04436 131 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 HHEXQ03014 270 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 PRSS36Q5K4E3 855 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 OR8D4Q8NGM9 314 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 RXFP4Q8TDU9 374 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 PDLIM5Q96HC4 596 aaKnown RBP14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SLC2A4RGQ9NR83 387 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 TAS2R4Q9NYW5 299 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 SLC22A7Q9Y694 548 aa14.91□□□□□ -0.02
SHANK1-204ENST00000391814 A0A0A6YYC8 382 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 CDC14CA4D256 554 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 I3L1I5 382 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 LRRTM3Q86VH5 581 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 CCNL2Q96S94 520 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 RSRP1Q9BUV0 290 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 DNAJB11Q9UBS4 358 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 TRAPPC2LQ9UL33 140 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 STRAPQ9Y3F4 350 aaKnown RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 IGHG1P01857 330 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 CD1EP15812 388 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 FXNQ16595 210 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 RIMKLAQ8IXN7 391 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 CCDC74BQ96LY2 380 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 WDR83Q9BRX9 315 aaKnown RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 RHOFQ9HBH0 211 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 FITM1A5D6W6 292 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 RAB5AP20339 215 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 SRPXP78539 464 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF750Q32MQ0 723 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 GABRG1Q8N1C3 465 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 KCNG3Q8TAE7 436 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF331Q9NQX6 463 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 A0A1B0GUH1 482 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 BTBD17A6NE02 478 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 FAM155AB1AL88 458 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 FOXE1O00358 373 aaPredicted RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 SSSCA1O60232 199 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 MMP2P08253 660 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 OR4E1P0C645 316 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 ZNF528Q3MIS6 628 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 UBAC2Q8NBM4 344 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 CLEC1AQ8NC01 280 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 C1SP09871 688 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 ECI1P42126 302 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 EEF1A2Q05639 463 aaKnown RBP14.9□□□□□ -0.02
SHANK1-204ENST00000391814 CTF1Q16619 201 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 ADGRG3Q86Y34 549 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 FIBINQ8TAL6 211 aa14.9□□□□□ -0.02
SHANK1-204ENST00000391814 LOC102725191A0A1B0GVB3 256 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 LEUTXA8MZ59 168 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 G3V3Q6 166 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 OR7C1O76099 320 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 TIMP2P16035 220 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 EVX1P49640 407 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 CASP6P55212 293 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 GLIPR1L1Q6UWM5 242 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 RBMXL3Q8N7X1 1067 aaKnown RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 DUS3LQ96G46 650 aaKnown RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 PPT2Q9UMR5 302 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 TMEM129A0AVI4 362 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 DUX1O43812 170 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 JTBO76095 146 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 FPR3P25089 353 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 HOXA11P31270 313 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF93P35789 620 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 ACKR1Q16570 336 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 MEP1BQ16820 701 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 OR13C8Q8NGS7 320 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 CDCA4Q9BXL8 241 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 BANF2Q9H503 90 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 SLC5A10A0PJK1 596 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 DRGXA6NNA5 263 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 H7BYZ3 331 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 FZD9O00144 591 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 SNAI1O95863 264 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 SOD1P00441 154 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 EEF1A1P68104 462 aaKnown RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 SLC14A2Q15849 920 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 ADOQ96SZ5 270 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 SDHBP21912 280 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 HNRNPA3P51991 378 aaKnown RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 TMEM25Q86YD3 366 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 TMEFF1Q8IYR6 380 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 C1orf198Q9H425 327 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 SCPEP1Q9HB40 452 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF354AO60765 605 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 PDGFBP01127 241 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 HIST1H1TP22492 207 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF280AP59817 542 aaPredicted RBP14.89□□□□□ -0.03
SHANK1-204ENST00000391814 CST6Q15828 149 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 LCN15Q6UWW0 184 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 MKXQ8IYA7 352 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 IGSF21Q96ID5 467 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 CABLES2Q9BTV7 478 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 VAMP8Q9BV40 100 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 PRSS16Q9NQE7 514 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 ZNF586Q9NXT0 402 aa14.89□□□□□ -0.03
SHANK1-204ENST00000391814 PSMB6P28072 239 aa14.88□□□□□ -0.03
SHANK1-204ENST00000391814 RGRP47804 291 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms