RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 TCF20Q9UGU0 1960 aaKnown RBP11.07□□□□□ -0.64
HERC6-203ENST00000380265 A0A1W2PQ45 241 aaPredicted RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 A0A1W2PQY0 241 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 MEX3AA1L020 520 aaKnown RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 CPED1A4D0V7 1026 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 S100A8P05109 93 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 F13BP05160 661 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 CCR2P41597 374 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 ETV3LQ6ZN32 361 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 BAP18Q8IXM2 172 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 GATSQ8NAP1 163 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 CLEC1AQ8NC01 280 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 RSRP1Q9BUV0 290 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 GHRLQ9UBU3 117 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 MSRAQ9UJ68 235 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 KLHDC2Q9Y2U9 406 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 TRIOBPQ9H2D6 2365 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 SLC35G6P0C7Q6 338 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 SMIM6P0DI80 62 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 EMDP50402 254 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 PGDP52209 483 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 CDK3Q00526 305 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 NR0B2Q15466 257 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 ELAVL1Q15717 326 aaKnown RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 OR2L3Q8NG85 312 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 RSPH9Q9H1X1 276 aaPredicted RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 CHMP1AQ9HD42 196 aaPredicted RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 CGGBP1Q9UFW8 167 aaPredicted RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 SLC27A6Q9Y2P4 619 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 CACNA1GO43497 2377 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 A0A0B4J2E0 115 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 A0A1B0GX12 115 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 DNAJB6O75190 326 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 IFNA6P05013 189 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 H2AFB1P0C5Y9 115 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 CD80P33681 288 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 PPP1R1AQ13522 171 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 C5orf46Q6UWT4 87 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 LRRC69Q6ZNQ3 347 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 ACBD4Q8NC06 268 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 ARL5BQ96KC2 179 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 TRIM2Q9C040 744 aa11.06□□□□□ -0.64
HERC6-203ENST00000380265 MRM2Q9UI43 246 aaKnown RBP11.06□□□□□ -0.64
HERC6-203ENST00000380265 SULT2B1O00204 365 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 GLCEO94923 617 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ITGA5P08648 1049 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 CPMP14384 443 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 NQO2P16083 231 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ABOP16442 354 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 NME2P22392 152 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 PTAFRP25105 342 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 GRK6P43250 576 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 TGIF1Q15583 401 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 MICBQ29980 383 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 POMZP3Q6PJE2 187 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 NPEPL1Q8NDH3 523 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 OR5AP2Q8NGF4 316 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 C20orf24Q9BUV8 137 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 RHOFQ9HBH0 211 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 B3GALT2O43825 422 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 OR10H2O60403 315 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 GPANK1O95872 356 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ITGB2P05107 769 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 SERPINA5P05154 406 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 CTXN1P60606 82 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ZNF345Q14585 488 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 MLF2Q15773 248 aaPredicted RBP11.05□□□□□ -0.64
HERC6-203ENST00000380265 ZIC1Q15915 447 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 SLC39A5Q6ZMH5 540 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ZNF704Q6ZNC4 412 aaPredicted RBP11.05□□□□□ -0.64
HERC6-203ENST00000380265 SLC35D2Q76EJ3 337 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 RD3Q7Z3Z2 195 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 CDRT4Q8N9R6 151 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 LOC100289279A0A1B0GTE1 492 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ABCD3P28288 659 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 OR2B8PP59922 312 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 KIRREL2Q6UWL6 708 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 OR2G2Q8NGZ5 317 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ISOC2Q96AB3 205 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 CLCC1Q96S66 551 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 PFDN5Q99471 154 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
HERC6-203ENST00000380265 SEMA6CQ9H3T2 930 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 CKLFQ9UBR5 152 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 ENTPD2Q9Y5L3 495 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 MDC1Q14676 2089 aaKnown RBP11.05□□□□□ -0.64
HERC6-203ENST00000380265 ANAPC1Q9H1A4 1944 aa11.05□□□□□ -0.64
HERC6-203ENST00000380265 DENND4AQ7Z401 1863 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 YKT6O15498 198 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 SPINT1O43278 529 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 LYPD3O95274 346 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 CD2P06729 351 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 S100PP25815 95 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 C9orf152Q5JTZ5 239 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 GLYATL3Q5SZD4 288 aa11.04□□□□□ -0.64
HERC6-203ENST00000380265 LPCAT3Q6P1A2 487 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms