RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 OR4C45A6NMZ5 311 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 RGS13O14921 159 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 CRABP1P29762 137 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 RAB25P57735 213 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 ZP4Q12836 540 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 PHF19Q5T6S3 580 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF385CQ66K41 422 aaPredicted RBP19.39■□□□□ 0.69
TRIM54-202ENST00000380075 PWWP2BQ6NUJ5 590 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 GLCCI1Q86VQ1 547 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 CCDC74BQ96LY2 380 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 DCBLD2Q96PD2 775 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 GFI1Q99684 422 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 DPAGT1Q9H3H5 408 aa19.39■□□□□ 0.69
TRIM54-202ENST00000380075 SPTBN2O15020 2390 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 A0A0B4J203 849 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 A0A1B0GVC2 190 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 FAM172BPA6NC97 362 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 A6NIN4 97 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 A6NIZ1 184 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 FTCDNL1E5RQL4 147 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 ARSBP15848 533 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 SCAND1P57086 179 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 RAP1BP61224 184 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 RAP1AP62834 184 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 NTRK2Q16620 822 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 SLC36A2Q495M3 483 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 LRRN1Q6UXK5 716 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 STAC2Q6ZMT1 411 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 BPHLQ86WA6 291 aaPredicted RBP19.38■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF417Q8TAU3 575 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 GPR148Q8TDV2 347 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 CAPSLQ8WWF8 208 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 OR8B4Q96RC9 309 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF587Q96SQ5 575 aaPredicted RBP19.38■□□□□ 0.69
TRIM54-202ENST00000380075 TSPAN10Q9H1Z9 355 aaPredicted RBP19.38■□□□□ 0.69
TRIM54-202ENST00000380075 SLC26A1Q9H2B4 701 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 C19orf25Q9UFG5 118 aaPredicted RBP19.38■□□□□ 0.69
TRIM54-202ENST00000380075 ETV7Q9Y603 341 aa19.38■□□□□ 0.69
TRIM54-202ENST00000380075 IGLV1-36A0A0B4J1U3 117 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 NPIPB13A6NJU9 1138 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 NPIPB4C9JG80 1138 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF208O43345 1280 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 TIAF1O95411 115 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 YES1P07947 543 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 RAB40ALP0C0E4 278 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 DPP4P27487 766 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 MSX1P28360 303 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 CCR9P51686 369 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 FBXW4P57775 412 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 DYRK1AQ13627 763 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 BCL2A1Q16548 175 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 SLC18B1Q6NT16 456 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 KRT74Q7RTS7 529 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF676Q8N7Q3 588 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 MFSD8Q8NHS3 518 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 SMIM4Q8WVI0 70 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 RAB40AQ8WXH6 277 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 TRAF4Q9BUZ4 470 aaPredicted RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 SLC25A18Q9H1K4 315 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 RANGRFQ9HD47 186 aaPredicted RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 SEC16AO15027 2179 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 TRBV5-7A0A0A0MS05 114 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 TRBV11-1A0A0K0K1C0 115 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 TPPPO94811 219 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 HLA-DQA2P01906 255 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 MRPS15P82914 257 aaKnown RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 FAM199XQ6PEV8 388 aaPredicted RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 CPEB2Q7Z5Q1 589 aaKnown RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 TMPRSS12Q86WS5 348 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 PPP1R3BQ86XI6 285 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 CMTM4Q8IZR5 234 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF433Q8N7K0 673 aaPredicted RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF454Q8N9F8 522 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 DTX3Q8N9I9 347 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 C4orf45Q96LM5 186 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 SMAD5Q99717 465 aaKnown RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 WDR77Q9BQA1 342 aaPredicted RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF275Q9NSD4 429 aaPredicted RBP19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ANKRD10Q9NXR5 420 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 ING3Q9NXR8 418 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 CLEC4AQ9UMR7 237 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 NUBP2Q9Y5Y2 271 aa19.37■□□□□ 0.69
TRIM54-202ENST00000380075 SLC22A23A1A5C7 686 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 A8MV72 311 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 ETV2O00321 342 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF593O00488 134 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 SULT1B1O43704 296 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 SLC16A7O60669 478 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 WISP1O95388 367 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 DHFRP00374 187 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 PLGP00747 810 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 BTCP35070 178 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 AGFG1P52594 562 aaKnown RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 RRAS2P62070 204 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 ROM1Q03395 351 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 NDUFA5Q16718 116 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 HES5Q5TA89 166 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 FAM205BPQ63HN1 556 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 SLC22A10Q63ZE4 541 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms