RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 BLOC1S5-TXNDC5H3BN57 136 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 OR5F1O95221 314 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 MT-ND1P03886 318 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 LCKP06239 509 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 IGFBP1P08833 259 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF250P15622 560 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 IL2RGP31785 369 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 MYBPC1Q00872 1141 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 MELKQ14680 651 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 MAPRE2Q15555 327 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 COQ5Q5HYK3 327 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 RINLQ6ZS11 566 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF584Q8IVC4 421 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 OR8J3Q8NGG0 315 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 CLDND2Q8NHS1 167 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF418Q8TF45 676 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-204ENST00000376643 TIMD4Q96H15 378 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 ECSITQ9BQ95 431 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 CCNB1IP1Q9NPC3 277 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 INIPQ9NRY2 104 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-204ENST00000376643 DECR2Q9NUI1 292 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 HIF1ANQ9NWT6 349 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 TAAR3PQ9P1P4 343 aa12.65□□□□□ -0.38
HDAC6-204ENST00000376643 EIF3KQ9UBQ5 218 aaKnown RBP12.65□□□□□ -0.38
HDAC6-204ENST00000376643 CGGBP1Q9UFW8 167 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-204ENST00000376643 IGLV3-9A0A075B6K5 115 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 BBIP1A8MTZ0 92 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 TPD52L2O43399 206 aaKnown RBP12.64□□□□□ -0.39
HDAC6-204ENST00000376643 HPXP02790 462 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 NAT2P11245 290 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 ACADSP16219 412 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 TCN1P20061 433 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-204ENST00000376643 LIPAP38571 399 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 UCP2P55851 309 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 MRPS34P82930 218 aaKnown RBP12.64□□□□□ -0.39
HDAC6-204ENST00000376643 SLC3A1Q07837 685 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 HIST3H3Q16695 136 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 ZMAT1Q5H9K5 638 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 FAM205BPQ63HN1 556 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 LRFN4Q6PJG9 635 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 WDR88Q6ZMY6 472 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 MEX3DQ86XN8 651 aaKnown RBP12.64□□□□□ -0.39
HDAC6-204ENST00000376643 LIPHQ8WWY8 451 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 TAMM41Q96BW9 452 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 SGTBQ96EQ0 304 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 JMJD8Q96S16 334 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 SEPHS2Q99611 448 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 SH3GL3Q99963 347 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 WFDC6Q9BQY6 131 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 RACGAP1Q9H0H5 632 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 CYSLTR2Q9NS75 346 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 ARGLU1Q9NWB6 273 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-204ENST00000376643 FZR1Q9UM11 496 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 MED31Q9Y3C7 131 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 CUBNO60494 3623 aa12.64□□□□□ -0.39
HDAC6-204ENST00000376643 A0A0G2JND7 137 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 PLSCR5A0PG75 271 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 LYNX1G3V0Z9 82 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 H3BSA7 217 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 OR7A10O76100 309 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 LYPD3O95274 346 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 FAM157BP0CG42 384 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 LYNX1P0DP58 116 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 GAAP10253 952 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 FUT1P19526 365 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 GCH1P30793 250 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 ZNF133P52736 654 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-204ENST00000376643 SEC24CP53992 1094 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 RPL18Q07020 188 aaKnown RBP12.63□□□□□ -0.39
HDAC6-204ENST00000376643 MAD2L1BPQ15013 274 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-204ENST00000376643 MSMPQ1L6U9 139 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 HFEQ30201 348 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 ZNF718Q3SXZ3 478 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 C10orf128Q5T292 105 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 ACSM5Q6NUN0 579 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 ARL9Q6T311 187 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 HDXQ7Z353 690 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 CARM1Q86X55 608 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 ALDH16A1Q8IZ83 802 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 TMEM239Q8WW34 195 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 MRPL13Q9BYD1 178 aaKnown RBP12.63□□□□□ -0.39
HDAC6-204ENST00000376643 NDEL1Q9GZM8 345 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 METTL17Q9H7H0 456 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-204ENST00000376643 NANOGQ9H9S0 305 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 NPHS2Q9NP85 383 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 AP3M1Q9Y2T2 418 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 SH3GLB1Q9Y371 365 aa12.63□□□□□ -0.39
HDAC6-204ENST00000376643 IGHV1-69-2A0A0G2JMI3 117 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 CLDN25C9JDP6 229 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 EDF1O60869 148 aaKnown RBP12.62□□□□□ -0.39
HDAC6-204ENST00000376643 PNPP00491 289 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 PATE4P0C8F1 98 aa12.62□□□□□ -0.39
HDAC6-204ENST00000376643 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms