RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 C17orf67Q0P5P2 114 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 TRIM61Q5EBN2 209 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 H0YGG7 62 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 EMX1Q04741 257 aaPredicted RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 ADGRF3Q8IZF5 1079 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 OR2L13Q8N349 312 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 EID2Q8N6I1 236 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF296Q8WUU4 475 aaPredicted RBP11.54□□□□□ -0.56
VPS13A-204ENST00000376634 MOKQ9UQ07 419 aa11.54□□□□□ -0.56
VPS13A-204ENST00000376634 NBASA2RRP1 2371 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 PPP5D1E7EU14 171 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 RAB27BO00194 218 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 GABREP78334 506 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SFT2D1Q8WV19 159 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 RTP4Q96DX8 246 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 MUTYHQ9UIF7 546 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 NXT1Q9UKK6 140 aaKnown RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 ABCD4O14678 606 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 OR8G1Q15617 311 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 MDGA2Q7Z553 956 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 TTC9BQ8N6N2 239 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 PAAF1Q9BRP4 392 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 NOX4Q9NPH5 578 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 ACSS1Q9NUB1 689 aaPredicted RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 XKRY2A2RUG3 117 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SSSCA1O60232 199 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 ENPP1P22413 925 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 ELLP55199 621 aaPredicted RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF626Q68DY1 528 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 MACROD1Q9BQ69 325 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 UTS2O95399 124 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 LAX1Q8IWV1 398 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SLC35E1Q96K37 410 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 PLK3Q9H4B4 646 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SCPEP1Q9HB40 452 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 RNF186Q9NXI6 227 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 RAB22AQ9UL26 194 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 RPL7L1Q6DKI1 246 aaKnown RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SFXN4Q6P4A7 337 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 IL37Q9NZH6 218 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 H7C1C5 153 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 OR8G3PP0DMU2 310 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 LCN6P62502 163 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 TCEAL8Q8IYN2 117 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 YIPF5Q969M3 257 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 GAR1Q9NY12 217 aaKnown RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 UBL3O95164 117 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SLC7A9P82251 487 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SOX4Q06945 474 aaPredicted RBP11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SEMA3BQ13214 749 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 KLHDC8BQ8IXV7 354 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 GPR12P47775 334 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 MFAP5Q13361 173 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 PRAMEF20Q5VT98 475 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 SLC30A3Q99726 388 aa11.53□□□□□ -0.56
VPS13A-204ENST00000376634 YKT6O15498 198 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 SCGB1C2P0DMR2 95 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 BTNL8Q6UX41 500 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 MBOAT2Q6ZWT7 520 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 OR4C5Q8NGB2 326 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 OR51A2Q8NGJ7 313 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 SLC35A4Q96G79 324 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 TRIB1Q96RU8 372 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 ROS1P08922 2347 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 SH2D7A6NKC9 451 aaPredicted RBP11.52□□□□□ -0.56
VPS13A-204ENST00000376634 ADAM12O43184 909 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 SRMP19623 302 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 KCNJ10P78508 379 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 GLYATL3Q5SZD4 288 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 C12orf49Q9H741 205 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 DUSP13Q9UII6 198 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 ADAM29Q9UKF5 820 aa11.52□□□□□ -0.56
VPS13A-204ENST00000376634 PTTG1IPP53801 180 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 FER1L6-AS2Q96M78 137 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 ARL2-SNX15V9GYD0 113 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 ACOD1A6NK06 481 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 KLRC4-KLRK1H3BQV0 150 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 SLC5A12Q1EHB4 618 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 OR2T11Q8NH01 316 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 DCAF16Q9NXF7 216 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 CD68P34810 354 aaPredicted RBP11.52□□□□□ -0.57
VPS13A-204ENST00000376634 RAB38P57729 211 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 BPIFB3P59826 476 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 ZNF468Q5VIY5 522 aaPredicted RBP11.52□□□□□ -0.57
VPS13A-204ENST00000376634 SEC22CQ9BRL7 303 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 TAF9BQ9HBM6 251 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 WNK3Q9BYP7 1800 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 H3BQ06 376 aaPredicted RBP11.52□□□□□ -0.57
VPS13A-204ENST00000376634 SMAD6O43541 496 aaKnown RBP11.52□□□□□ -0.57
VPS13A-204ENST00000376634 DOK2O60496 412 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 RAB5AP20339 215 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 NPY4RP50391 375 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 MS4A2Q01362 244 aa11.52□□□□□ -0.57
VPS13A-204ENST00000376634 NAXDQ8IW45 347 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms