RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MFSD4AQ8N468 514 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 MAP3K3Q99759 626 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 RRAGCQ9HB90 399 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 MRPS28Q9Y2Q9 187 aaKnown RBP9.39□□□□□ -0.91
PTCH1-204ENST00000375290 PCDHGA1Q9Y5H4 931 aa9.39□□□□□ -0.91
PTCH1-204ENST00000375290 ARGFXA6NJG6 315 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 C17orf105B2RV13 164 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SEC14L6B5MCN3 397 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 NTSR1P30989 418 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 GLYATL3Q5SZD4 288 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 DEGS2Q6QHC5 323 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 FN3KRPQ9HA64 309 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 PURGQ9UJV8 347 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 FEZF1A0PJY2 475 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR6C76A6NM76 312 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 AIFM1O95831 613 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 F7P08709 466 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 CDK5R1Q15078 307 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 PLA1AQ53H76 456 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 GABRG1Q8N1C3 465 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR13C2Q8NGS9 318 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SPOCK3Q9BQ16 436 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SULT2B1O00204 365 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 EPXP11678 715 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SHC1P29353 583 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 RPL12P30050 165 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 DLK1P80370 383 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR2W3Q7Z3T1 314 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 ABI3BPQ7Z7G0 1075 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SENP5Q96HI0 755 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF225Q9UK10 706 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LIMS3P0CW19 117 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LIMS4P0CW20 117 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 UBE2NP61088 152 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 TMEM184AQ6ZMB5 413 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LCATP04180 440 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 ARNTP27540 789 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 CCKARP32238 428 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 EMP3P54852 163 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LIPIQ6XZB0 460 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 FAM58AQ8N1B3 248 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR13D1Q8NGV5 346 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 USP36Q9P275 1121 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 FIGNL2A6NMB9 653 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 DRD1P21728 446 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 FAM189BP81408 668 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OC90Q02509 493 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 C18orf63Q68DL7 685 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 BBS1Q8NFJ9 593 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR51S1Q8NGJ8 323 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SLC35A4Q96G79 324 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 WDR77Q9BQA1 342 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 POM121CA8CG34 1229 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 NPIPB8E9PQR5 432 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 NCR1O76036 304 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 GJB5O95377 273 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF888P0CJ79 500 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 COX5AP20674 150 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 PFN3P60673 137 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LCN10Q6JVE6 187 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 DPPA3Q6W0C5 159 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 CABLES2Q9BTV7 478 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR51I2Q9H344 312 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OBP2AQ9NY56 170 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF749O43361 778 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 HOXD9P28356 352 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 GDI1P31150 447 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 MRPS34P82930 218 aaKnown RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LEXMQ3ZCV2 418 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 RAET1LQ5VY80 246 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 DBX2Q6ZNG2 339 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SSX7Q7RTT5 188 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 LSRQ86X29 649 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-204ENST00000375290 PPP1R3BQ86XI6 285 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 ZNF610Q8N9Z0 462 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 NHLRC2Q8NBF2 726 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 TTTY10Q9BZA0 68 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 HAO2Q9NYQ3 351 aa9.38□□□□□ -0.91
PTCH1-204ENST00000375290 SMAD9O15198 467 aaKnown RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 F3P13726 295 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 KIR2DL3P43628 341 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 NKX2-1P43699 371 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 CCR6P51684 374 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 ZP2Q05996 745 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 TEAD2Q15562 447 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 SLC36A2Q495M3 483 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 PLXDC2Q6UX71 529 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 COX15Q7KZN9 410 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-204ENST00000375290 MMP21Q8N119 569 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 DUSP23Q9BVJ7 150 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 NKX2-4Q9H2Z4 354 aa9.37□□□□□ -0.91
PTCH1-204ENST00000375290 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms