RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SPRY4Q9C004 299 aa17.56■□□□□ 0.4
HDAC1-201ENST00000373548 A0A1W2PNR3 127 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 EIF4EP06730 217 aaKnown RBP17.55■□□□□ 0.4
HDAC1-201ENST00000373548 SPARCP09486 303 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 JMJD7P0C870 316 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 ADH6P28332 368 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 EIF1P41567 113 aaKnown RBP17.55■□□□□ 0.4
HDAC1-201ENST00000373548 RFX2P48378 723 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 ADAM8P78325 824 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 GLO1Q04760 184 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 NHLRC1Q6VVB1 395 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 NRARPQ7Z6K4 114 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 LRRC28Q86X40 367 aaPredicted RBP17.55■□□□□ 0.4
HDAC1-201ENST00000373548 TMEM156Q8N614 296 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 SAMD12Q8N8I0 201 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 TRMT10AQ8TBZ6 339 aaKnown RBP17.55■□□□□ 0.4
HDAC1-201ENST00000373548 NSMAFQ92636 917 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 DERL3Q96Q80 235 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 OR5B2Q96R09 309 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 CYSLTR2Q9NS75 346 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 EXTL2Q9UBQ6 330 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 KMT2EQ8IZD2 1858 aa17.55■□□□□ 0.4
HDAC1-201ENST00000373548 LINC00854A0A1B0GVQ3 168 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 A0A1W2PNU3 283 aaPredicted RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 OR4C45A6NMZ5 311 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 HSPB2A8KAH6 182 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 MPZL1O95297 269 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 EPXP11678 715 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ATF1P18846 271 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 SRMP19623 302 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 PTGS2P35354 604 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 Q0VFX4 171 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 SELENBP1Q13228 472 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 HSPB2Q16082 182 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 CDCP2Q5VXM1 449 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 FAM205BPQ63HN1 556 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 SLC18B1Q6NT16 456 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 LRRN1Q6UXK5 716 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ASB17Q8WXJ9 295 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 PCSK5Q92824 1860 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 LIN37Q96GY3 246 aaPredicted RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 RPH3AQ9Y2J0 694 aaPredicted RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 AK6Q9Y3D8 172 aaKnown RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 C9orf172C9J069 976 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 RAB40ALP0C0E4 278 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 P2RY4P51582 365 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ASAH1Q13510 395 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ZNF468Q5VIY5 522 aaPredicted RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 SPATC1Q76KD6 591 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 DND1Q8IYX4 353 aaKnown RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 PRSS35Q8N3Z0 413 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 Q8N402 240 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ADPRHL1Q8NDY3 354 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 SLC25A43Q8WUT9 341 aaPredicted RBP17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ZBTB8AQ96BR9 441 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 ELOVL3Q9HB03 270 aa17.54■□□□□ 0.4
HDAC1-201ENST00000373548 IGKV1D-43A0A0B4J1Z2 117 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 CENPBD1B2RD01 187 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SFTPDP35247 375 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 OR2B6P58173 313 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SLC17A1Q14916 467 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SLC22A10Q63ZE4 541 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 CELF2-AS1Q8N7Q2 184 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SLC26A10Q8NG04 563 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 OR4M1Q8NGD0 313 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 OR5H6Q8NGV6 325 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 GFI1Q99684 422 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 EMC6Q9BV81 110 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 HPF1Q9NWY4 346 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 FARSAQ9Y285 508 aaKnown RBP17.53■□□□□ 0.4
HDAC1-201ENST00000373548 A0A087WZY1 265 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 A0A0B4J203 849 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 TRBV5-5A0A0J9YX44 114 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 G3V3Y1 287 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SNPHO15079 494 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 NPR2P20594 1047 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 BIDP55957 195 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 ROM1Q03395 351 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SSPNQ14714 243 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 TMEM176BQ3YBM2 270 aaPredicted RBP17.53■□□□□ 0.4
HDAC1-201ENST00000373548 Q499Y3 187 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 DNM1P34Q6PK57 102 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 ZNF679Q8IYX0 411 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 GTPBP8Q8N3Z3 284 aaPredicted RBP17.53■□□□□ 0.4
HDAC1-201ENST00000373548 GNRHR2Q96P88 292 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 NEDD4LQ96PU5 975 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 ABHD6Q9BV23 337 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 SLC25A18Q9H1K4 315 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 KLHL13Q9P2N7 655 aa17.53■□□□□ 0.4
HDAC1-201ENST00000373548 ZNF814B7Z6K7 855 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 WNT11O96014 354 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 HLA-DQB1P01920 261 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 LIFP15018 202 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 DPP4P27487 766 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 KIR3DL2P43630 455 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 CD300CQ08708 224 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 CHAF1BQ13112 559 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 FDX2Q6P4F2 183 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 C4orf45Q96LM5 186 aa17.52■□□□□ 0.4
HDAC1-201ENST00000373548 DCBLD2Q96PD2 775 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms