RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FABP7O15540 132 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 TPOP07202 933 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 SRMP19623 302 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 HOXC8P31273 242 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 S100A11P31949 105 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 CSN1S1P47710 185 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 KIAA1024LP59773 190 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 RPL11P62913 178 aaKnown RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 RACK1P63244 317 aaKnown RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 C9orf152Q5JTZ5 239 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 ZNF626Q68DY1 528 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 TMEM200AQ86VY9 491 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 OR2L13Q8N349 312 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 OR6K3Q8NGY3 331 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 RPL3LQ92901 407 aaKnown RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 SLC35E1Q96K37 410 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 DCLRE1CQ96SD1 692 aaKnown RBP10.62□□□□□ -0.71
VCL-202ENST00000372755 PLK3Q9H4B4 646 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 CDCP1Q9H5V8 836 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 HPNP05981 417 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 GCAP28676 217 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 EDDM3AQ14507 147 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 ZMAT1Q5H9K5 638 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 SPACA1Q9HBV2 294 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 UGT2A1Q9Y4X1 527 aa10.62□□□□□ -0.71
VCL-202ENST00000372755 GRPP07492 148 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 BCL6P41182 706 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 TGM4P49221 684 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 RPL27P61353 136 aaKnown RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 PHYHD1Q5SRE7 291 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 OR10K2Q6IF99 312 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 HIST2H3AQ71DI3 136 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 FAM58AQ8N1B3 248 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 PGBD5Q8N414 524 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 C11orf40Q8WZ69 217 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 SNX11Q9Y5W9 270 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ADAM12O43184 909 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ACKR3P25106 362 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 TAGLN2P37802 199 aaKnown RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 CCR9P51686 369 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 UBE2G1P62253 170 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 FLI1Q01543 452 aaPredicted RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 IHHQ14623 411 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 KCTD11Q693B1 232 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 B3GNT9Q6UX72 402 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 FAM71CQ8NEG0 241 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 OR2AE1Q8NHA4 323 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 C12orf49Q9H741 205 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 SLCO2B1O94956 709 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 CSF3P09919 207 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 CD27P26842 260 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 SNRPGP62308 76 aaKnown RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 TRIM61Q5EBN2 209 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ADGRF3Q8IZF5 1079 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ATOH1Q92858 354 aaPredicted RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 CSF3RQ99062 836 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ELF4Q99607 663 aaPredicted RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 NAA50Q9GZZ1 169 aaKnown RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 TM4SF4P48230 202 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 CSNK1G2P78368 415 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ALKAL1Q6UXT8 129 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 DBX2Q6ZNG2 339 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 LSMEM2Q8N112 164 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 LMNTD1Q8N9Z9 388 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 OR13F1Q8NGS4 319 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 OR5H6Q8NGV6 325 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 DVL3Q92997 716 aaPredicted RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 QPCTLQ9NXS2 382 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 MTCH1Q9NZJ7 389 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ZNF749O43361 778 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 LIM2P55344 173 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 TMEM64Q6YI46 380 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 RETREG3Q86VR2 466 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 SLC22A12Q96S37 553 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 SIAEQ9HAT2 523 aa10.61□□□□□ -0.71
VCL-202ENST00000372755 EXO1Q9UQ84 846 aaKnown RBP10.61□□□□□ -0.71
VCL-202ENST00000372755 ATP6V1G2-DDX39BF2Z307 99 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 TRIM23P36406 574 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 NPY4RP50391 375 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 PHLDA2Q53GA4 152 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 ANGPTL5Q86XS5 388 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 RIMS4Q9H426 269 aaPredicted RBP10.6□□□□□ -0.71
VCL-202ENST00000372755 ASIC5Q9NY37 505 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 SELENOFO60613 162 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 F11P03951 625 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 DTYMKP23919 212 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 TEKQ02763 1124 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 COX20Q5RI15 118 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 ZNF511Q8NB15 262 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 RASD2Q96D21 266 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 SUCNR1Q9BXA5 334 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 AMBRA1Q9C0C7 1298 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 POFUT1Q9H488 388 aa10.6□□□□□ -0.71
VCL-202ENST00000372755 TAS2R5Q9NYW4 299 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms