RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SPHK2Q9NRA0 654 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 SERGEFQ9UGK8 458 aa4.92□□□□□ -1.62
ATG4A-204ENST00000372246 NOP16Q9Y3C1 178 aaKnown RBP4.92□□□□□ -1.62
ATG4A-204ENST00000372246 DMDP11532 3685 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 NUP210Q8TEM1 1887 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM235A6NFC5 223 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MSGN1A6NI15 193 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 HCRTR1O43613 425 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PRAF2O60831 178 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 STX11O75558 287 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 GLSO94925 669 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 IGKV1D-16P01601 117 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 AMY2AP04746 511 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 FABP1P07148 127 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 C8AP07357 584 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 GAAP10253 952 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PGAM2P15259 253 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SELPP16109 830 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SPI1P17947 270 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 POU3F4P49335 361 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 HOXA1P49639 335 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ELAVL2Q12926 359 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ERV3-1Q14264 604 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 DCST2Q5T1A1 773 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ASPHD2Q6ICH7 369 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 LEG1Q6P5S2 330 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 KIRREL2Q6UWL6 708 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 RD3Q7Z3Z2 195 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 CCDC36Q8IYA8 594 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 C10orf53Q8N6V4 93 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ACBD4Q8NC06 268 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OR4K14Q8NGD5 310 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OR51A2Q8NGJ7 313 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 CCL4L1Q8NHW4 92 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ELP5Q8TE02 316 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 C2orf15Q8WU43 125 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SUSD6Q92537 303 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 HAVCR1Q96D42 359 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 CLCC1Q96S66 551 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 WDR77Q9BQA1 342 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 LAT2Q9GZY6 243 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ATG5Q9H1Y0 275 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MED17Q9NVC6 651 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MRM2Q9UI43 246 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 TMED7Q9Y3B3 224 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MED31Q9Y3C7 131 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SLC22A7Q9Y694 548 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF780BQ9Y6R6 833 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 LRRK1Q38SD2 2015 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 NOTCH4Q99466 2003 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 LOC101059948A0A1B0GTJ6 334 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 DCDC2BA2VCK2 349 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OR2AT4A6NND4 320 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 HIDE1A8MVS5 230 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ACOT7O00154 380 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ATXN7O15265 892 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OIP5O43482 229 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 FGF17O60258 216 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 CTAG2O75638 210 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 HLA-AP01891 365 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SOD2P04179 222 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 DCNP07585 359 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SLC35G4P0C7Q5 338 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 AKR1C4P17516 323 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 RCC1P18754 421 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PRDX1Q06830 199 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 DHRS2Q13268 280 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MEP1BQ16820 701 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ALG10BQ5I7T1 473 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ACER2Q5QJU3 275 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ELFN2Q5R3F8 820 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ATPAF1Q5TC12 328 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PLPP4Q5VZY2 271 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OLFML2AQ68BL7 652 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MOB3CQ70IA8 216 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 ABHD13Q7L211 337 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OVCH1Q7RTY7 1134 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 C12orf45Q8N5I9 185 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 NPEPL1Q8NDH3 523 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OR56A1Q8NGH5 318 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OR52E1Q8NGJ3 308 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 OR6K3Q8NGY3 331 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SETD7Q8WTS6 366 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SOCS4Q8WXH5 440 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SCARF2Q96GP6 870 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 C10orf90Q96M02 699 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 SLC6A7Q99884 636 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MTHFD2LQ9H903 347 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PLEKHA1Q9HB21 404 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 RRAGCQ9HB90 399 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PRSS16Q9NQE7 514 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 AKAP7Q9P0M2 348 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 GHRLQ9UBU3 117 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 TINAGQ9UJW2 476 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 RPH3AQ9Y2J0 694 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 MRPS23Q9Y3D9 190 aaKnown RBP4.91□□□□□ -1.62
ATG4A-204ENST00000372246 TRPM6Q9BX84 2022 aa4.91□□□□□ -1.62
ATG4A-204ENST00000372246 PLXNA2O75051 1894 aa4.9□□□□□ -1.62
ATG4A-204ENST00000372246 hCG_1809904A0A1W2PP81 198 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms