RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
LDB3-204ENST00000372066 TEKT2Q9UIF3 430 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 ZNF281Q9Y2X9 895 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 TMEM72A0PK05 275 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 NPIPB13A6NJU9 1138 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 NPIPB4C9JG80 1138 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 F13BP05160 661 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 KRT8P05787 483 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 APOBEC1P41238 236 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 CASP3P42574 277 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 NR4A2P43354 598 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 RPL27P61353 136 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 RPS18P62269 152 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 C4orf17Q53FE4 359 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 TMEM205Q6UW68 189 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 ADGRG3Q86Y34 549 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 UBQLNLQ8IYU4 475 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 RDH10Q8IZV5 341 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 ZNRF4Q8WWF5 429 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 ZNF524Q96C55 264 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 KCNJ15Q99712 375 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 TXNIPQ9H3M7 391 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 WDR54Q9H977 334 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 ACOXLQ9NUZ1 547 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 TAS2R5Q9NYW4 299 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 ZNF346Q9UL40 294 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 RASD1Q9Y272 281 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 FARSAQ9Y285 508 aaKnown RBP12.66□□□□□ -0.38
LDB3-204ENST00000372066 LRRK2Q5S007 2527 aa12.66□□□□□ -0.38
LDB3-204ENST00000372066 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ETV2O00321 342 aaPredicted RBP12.65□□□□□ -0.38
LDB3-204ENST00000372066 DVL2O14641 736 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ADAM10O14672 748 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ITGA10O75578 1167 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 SERPINI2O75830 405 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ZFAND5O76080 213 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 OR6A2O95222 327 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 PRKCAP17252 672 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ELK1P19419 428 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 MAP2K3P46734 347 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 INPP1P49441 399 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 CCL11P51671 97 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 HCCSP53701 268 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.38
LDB3-204ENST00000372066 CBX3Q13185 183 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 HSD17B12Q53GQ0 312 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 FAM205BPQ63HN1 556 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 PYHIN1Q6K0P9 492 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 CELF2-AS1Q8N7Q2 184 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ENKURQ8TC29 256 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 SMAP2Q8WU79 429 aaPredicted RBP12.65□□□□□ -0.38
LDB3-204ENST00000372066 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 MR1Q95460 341 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 ADAD1Q96M93 576 aaKnown RBP12.65□□□□□ -0.38
LDB3-204ENST00000372066 INTS14Q96SY0 518 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 PPIL3Q9H2H8 161 aaKnown RBP12.65□□□□□ -0.38
LDB3-204ENST00000372066 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
LDB3-204ENST00000372066 PCNX3Q9H6A9 2034 aa12.65□□□□□ -0.38
LDB3-204ENST00000372066 IGLV3-32A0A0A0MS00 114 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 TRBV11-1A0A0K0K1C0 115 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 A6NIZ1 184 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 ZNF208O43345 1280 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 TPTEP56180 551 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 RAP1BP61224 184 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 RAP1AP62834 184 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 ZP4Q12836 540 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 CHAF1BQ13112 559 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 TAB1Q15750 504 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 FAM27D1Q5T7N8 215 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 SHISA6Q6ZSJ9 500 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 LSRQ86X29 649 aaPredicted RBP12.64□□□□□ -0.39
LDB3-204ENST00000372066 MFSD8Q8NHS3 518 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 TRMT10AQ8TBZ6 339 aaKnown RBP12.64□□□□□ -0.39
LDB3-204ENST00000372066 CPT1CQ8TCG5 803 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 DUSP19Q8WTR2 217 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 SPSB2Q99619 263 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 KLHDC3Q9BQ90 382 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 WDR77Q9BQA1 342 aaPredicted RBP12.64□□□□□ -0.39
LDB3-204ENST00000372066 CRB3Q9BUF7 120 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 TTTY10Q9BZA0 68 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 C11orf54Q9H0W9 315 aaPredicted RBP12.64□□□□□ -0.39
LDB3-204ENST00000372066 RBFOX1Q9NWB1 397 aaKnown RBP12.64□□□□□ -0.39
LDB3-204ENST00000372066 LAMP5Q9UJQ1 280 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 IGHV3-20A0A0C4DH32 117 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 PRSS37A4D1T9 235 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 ARGFXA6NJG6 315 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 CENPBD1B2RD01 187 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 PLA2G10O15496 165 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 ARHGEF9O43307 516 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 SSX4O60224 188 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 FZD7O75084 574 aa12.64□□□□□ -0.39
LDB3-204ENST00000372066 AGFG2O95081 481 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms