RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ADGRF3Q8IZF5 1079 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 LRRC18Q8N456 261 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ST8SIA1Q92185 356 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 PSMF1Q92530 271 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 PAPOLGQ9BWT3 736 aaKnown RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 YARS2Q9Y2Z4 477 aaKnown RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 SULT1C4O75897 302 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ENPP1P22413 925 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 MAP2K6P52564 334 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 HTRA4P83105 476 aaPredicted RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 FABP5Q01469 135 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 CDK5R1Q15078 307 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC36A2Q495M3 483 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 KMT5CQ86Y97 462 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 OR14K1Q8NGZ2 314 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 C20orf85Q9H1P6 137 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 IL20Q9NYY1 176 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 POMT2Q9UKY4 750 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 B8ZZF3 427 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 NAT1P18440 290 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 TUBG1P23258 451 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 CCR6P51684 374 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 C21orf58P58505 322 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ERVK-16P61578 105 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 RAE1P78406 368 aaKnown RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 RAB31Q13636 194 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 HTR4Q13639 388 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ACKR1Q16570 336 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 C12orf73Q69YU5 71 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF784Q8NCA9 323 aaPredicted RBP10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 STT3BQ8TCJ2 826 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 FGF14Q92915 247 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 HINT2Q9BX68 163 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 A4GNTQ9UNA3 340 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 CHST2Q9Y4C5 530 aa10.85□□□□□ -0.67
DEPDC1-201ENST00000370966 C1QBP02746 253 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 PNLIPRP2P54317 469 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 CARD18P57730 90 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 C1orf53Q5VUE5 145 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF529Q6P280 563 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 PLPP7Q8NBV4 271 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 DNAJB11Q9UBS4 358 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 KIF25Q9UIL4 384 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 LILRA5A6NI73 299 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 AGAP14A8MT82 685 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 C1orf196B1AJZ1 125 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 AIPO00170 330 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 PPM1DO15297 605 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 EIF2S3P41091 472 aaKnown RBP10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 GLYR1Q49A26 553 aaPredicted RBP10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 TRIM61Q5EBN2 209 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 LPCAT3Q6P1A2 487 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 OR5H6Q8NGV6 325 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 ZNF649Q9BS31 505 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 SEMA4CQ9C0C4 833 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 CHST11Q9NPF2 352 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 C1orf123Q9NWV4 160 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 SPTY2D1-AS1A0A0U1RR47 76 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 A6NL46 340 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 KRBOX1C9JBD0 128 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 MCRIP1C9JLW8 97 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 ACTL6BO94805 426 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 BTG2P78543 158 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 S100A12P80511 92 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 EGR3Q06889 387 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 RPL18Q07020 188 aaKnown RBP10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 ACSM1Q08AH1 577 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 SLC51BQ86UW2 128 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 OR9K2Q8NGE7 335 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 ARHGDIGQ99819 225 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 RHNO1Q9BSD3 238 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 LUZP4Q9P127 313 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 FBXL2Q9UKC9 423 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 NOSIPQ9Y314 301 aaKnown RBP10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 PRSS23O95084 383 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 ECI1P42126 302 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 SRPXP78539 464 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 HSF1Q00613 529 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 OR2L13Q8N349 312 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 MOB1AQ9H8S9 216 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 COQ3Q9NZJ6 369 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
DEPDC1-201ENST00000370966 TMEM200CA6NKL6 621 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 SOD1P00441 154 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 S100A11P31949 105 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 METAP1P53582 386 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 MFGE8Q08431 387 aaPredicted RBP10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 PEA15Q15121 130 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 ANGPTL5Q86XS5 388 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF775Q96BV0 537 aaPredicted RBP10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 FER1L6-AS2Q96M78 137 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF346Q9UL40 294 aaKnown RBP10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 PCDHGA1Q9Y5H4 931 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 A0A1B0GV50 99 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 A0A1W2PS29 197 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 ZC3H12DA2A288 527 aaKnown RBP10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 PRAMEF27A3QJZ7 478 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 K7EPK0 472 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms