RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 FKBP7Q9Y680 259 aa13.21□□□□□ -0.29
RPF1-202ENST00000370656 A0A087WUJ7 227 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 ZAR1LA6NP61 321 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 M0R1B8 84 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 NDUFS8O00217 210 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 ETV2O00321 342 aaPredicted RBP13.2□□□□□ -0.3
RPF1-202ENST00000370656 SMAD9O15198 467 aaKnown RBP13.2□□□□□ -0.3
RPF1-202ENST00000370656 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
RPF1-202ENST00000370656 FPR3P25089 353 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 PDLIM4P50479 330 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 CRISP1P54107 249 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 UGT2B15P54855 530 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 CSNK2A1P68400 391 aaPredicted RBP13.2□□□□□ -0.3
RPF1-202ENST00000370656 TEKQ02763 1124 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 GGTLC2Q14390 218 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 SLC25A53Q5H9E4 307 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 WBP2NLQ6ICG8 309 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 OR7E24Q6IFN5 339 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 TMPRSS11FQ6ZWK6 438 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 TMCO5AQ8N6Q1 288 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 CLDN22Q8N7P3 220 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 SETD9Q8NE22 299 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 OR5W2Q8NH69 310 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 PIGXQ8TBF5 258 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 TMEM239Q8WW34 195 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 C3orf49Q96BT1 292 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 PIMREGQ9BSJ6 248 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 SLC19A3Q9BZV2 496 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 CTPS2Q9NRF8 586 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 SERINC1Q9NRX5 453 aa13.2□□□□□ -0.3
RPF1-202ENST00000370656 TNFAIP8O95379 198 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 CLIC3O95833 236 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 GGT2P36268 569 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 SLC1A3P43003 542 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 CCR4P51679 360 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 CXCR4P61073 352 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 SPOCK1Q08629 439 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 CBFBQ13951 182 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
RPF1-202ENST00000370656 IL17RELQ6ZVW7 336 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 C8orf59Q8N0T1 100 aaPredicted RBP13.19□□□□□ -0.3
RPF1-202ENST00000370656 TMEM255BQ8WV15 326 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 APH1AQ96BI3 265 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 RIBC2Q9H4K1 309 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 ASB6Q9NWX5 421 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 TAS2R16Q9NYV7 291 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 TMEM5Q9Y2B1 443 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 NOSIPQ9Y314 301 aaKnown RBP13.19□□□□□ -0.3
RPF1-202ENST00000370656 SLC25A15Q9Y619 301 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 ATP23Q9Y6H3 246 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 ARFGEF3Q5TH69 2177 aa13.19□□□□□ -0.3
RPF1-202ENST00000370656 TRIM64CA6NLI5 447 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 GPR171O14626 319 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 PNMTP11086 282 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 APEHP13798 732 aaKnown RBP13.18□□□□□ -0.3
RPF1-202ENST00000370656 EDNRAP25101 427 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 APOBEC3AP31941 199 aaPredicted RBP13.18□□□□□ -0.3
RPF1-202ENST00000370656 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
RPF1-202ENST00000370656 COPZ1P61923 177 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 RUNX1T1Q06455 604 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 CD47Q08722 323 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 QPRTQ15274 297 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 NDUFAF6Q330K2 333 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 LAIR2Q6ISS4 152 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 RRM2BQ7LG56 351 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 RHOXF1Q8NHV9 184 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 LIPHQ8WWY8 451 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 HDAC2Q92769 488 aaKnown RBP13.18□□□□□ -0.3
RPF1-202ENST00000370656 ZNF566Q969W8 418 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 ZNF524Q96C55 264 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 TMEM43Q9BTV4 400 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 KRCC1Q9NPI7 259 aaPredicted RBP13.18□□□□□ -0.3
RPF1-202ENST00000370656 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
RPF1-202ENST00000370656 IL20Q9NYY1 176 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 GMPPBQ9Y5P6 360 aa13.18□□□□□ -0.3
RPF1-202ENST00000370656 IGKV3D-15A0A087WSY6 115 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 SLC35F4A4IF30 521 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 SULT2B1O00204 365 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 PTP4A3O75365 173 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 IGHV3-9P01782 118 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 GABRB1P18505 474 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 PGCP20142 388 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 NR4A2P43354 598 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 DIO1P49895 249 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 EFNB1P98172 346 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 CDK5Q00535 292 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 BLMHQ13867 455 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
RPF1-202ENST00000370656 ALG10BQ5I7T1 473 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 C6orf141Q5SZD1 244 aa13.17□□□□□ -0.3
RPF1-202ENST00000370656 SLX4IPQ5VYV7 408 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms