RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 SESN1Q9Y6P5 492 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 NSD1Q96L73 2696 aaPredicted RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 PRAMEF25A6NGN4 478 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 KIAA1324LA8MWY0 1029 aaPredicted RBP13.36□□□□□ -0.27
LMO4-201ENST00000370542 C5orf58C9J3I9 102 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 PCDH7O60245 1069 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 IL3P08700 152 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 NUDT7P0C024 238 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 CD53P19397 219 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 UQCRC2P22695 453 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 CTSSP25774 331 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 POU1F1P28069 291 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 AQP1P29972 269 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 CHI3L1P36222 383 aaPredicted RBP13.36□□□□□ -0.27
LMO4-201ENST00000370542 IFNGR2P38484 337 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 CAPZA2P47755 286 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 MVDP53602 400 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 GAS1P54826 345 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 SORDQ00796 357 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 BDH1Q02338 343 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 ZNF763Q0D2J5 394 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 PDE7AQ13946 482 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 TRAM1Q15629 374 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 NNATQ16517 81 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 GPR139Q6DWJ6 353 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 FAM180BQ6P0A1 224 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 CXXC5Q7LFL8 322 aaKnown RBP13.36□□□□□ -0.27
LMO4-201ENST00000370542 LRRC28Q86X40 367 aaPredicted RBP13.36□□□□□ -0.27
LMO4-201ENST00000370542 CCDC116Q8IYX3 515 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 C16orf78Q8WTQ4 265 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 NRGNQ92686 78 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 RFKQ969G6 155 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 LRRC46Q96FV0 321 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 G6PC3Q9BUM1 346 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 BEX2Q9BXY8 128 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 DPAGT1Q9H3H5 408 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 A4GALTQ9NPC4 353 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 MYNNQ9NPC7 610 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 IL20Q9NYY1 176 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 CAMK2AQ9UQM7 478 aa13.36□□□□□ -0.27
LMO4-201ENST00000370542 SF3B6Q9Y3B4 125 aaKnown RBP13.36□□□□□ -0.27
LMO4-201ENST00000370542 JMJD1CQ15652 2540 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 A6NNC1 897 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 PRODHO43272 600 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 AKAP8O43823 692 aaKnown RBP13.35□□□□□ -0.27
LMO4-201ENST00000370542 GOSR1O95249 250 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 ETFAP13804 333 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 SLC6A1P30531 599 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 SRD5A2P31213 254 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 OPRM1P35372 400 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 PNLIPRP2P54317 469 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 DSTNP60981 165 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 HOXC5Q00444 222 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 MXD1Q05195 221 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 GAB1Q13480 694 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 MFSD13AQ14CX5 517 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 ZNF57Q68EA5 555 aaPredicted RBP13.35□□□□□ -0.27
LMO4-201ENST00000370542 PAMR1Q6UXH9 720 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 NPSR1Q6W5P4 371 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 YRDCQ86U90 279 aaKnown RBP13.35□□□□□ -0.27
LMO4-201ENST00000370542 MED12LQ86YW9 2145 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 PPCDCQ96CD2 204 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 OTUB1Q96FW1 271 aaPredicted RBP13.35□□□□□ -0.27
LMO4-201ENST00000370542 IL4I1Q96RQ9 567 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 ATF6BQ99941 703 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 JAM3Q9BX67 310 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 SLC35C2Q9NQQ7 365 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 DNAJC27Q9NZQ0 273 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 SLC23A1Q9UHI7 598 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 ST6GALNAC2Q9UJ37 374 aa13.35□□□□□ -0.27
LMO4-201ENST00000370542 CSPG4Q6UVK1 2322 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 A0A087WV62 115 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 H3BN98 237 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 I3L521 148 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 AKR7A2O43488 359 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 CHP2O43745 196 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 OR10H3O60404 316 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 TBX19O60806 448 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 RCBTB2O95199 551 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 IFI6P09912 130 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 EPXP11678 715 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
LMO4-201ENST00000370542 OR1E2P47887 323 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 RFX3P48380 749 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 MTNR1BP49286 362 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 SNTB1Q13884 538 aaKnown RBP13.34□□□□□ -0.27
LMO4-201ENST00000370542 GALEQ14376 348 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 PLA1AQ53H76 456 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 COMMD7Q86VX2 200 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 C9orf106Q8NAJ2 232 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 OR9A2Q8NGT5 310 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 OR52N1Q8NH53 320 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 CDC26Q8NHZ8 85 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 MAL2Q969L2 176 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 RFT1Q96AA3 541 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 UPRTQ96BW1 309 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms