RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NEIL2Q969S2 332 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 ANKRD9Q96BM1 317 aaPredicted RBP6.21□□□□□ -1.41
CSDE1-204ENST00000369530 DDOQ99489 341 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 KLHL9Q9P2J3 617 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 TCFL5Q9UL49 500 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 A0A1B0GVC2 190 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 C2orf92A0A1B0GVN3 265 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TRDV1A0A1B0GX56 115 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 RNF222A6NCQ9 220 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 SNRPGP15A8MWD9 76 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ETV2O00321 342 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF593O00488 134 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 CASKO14936 926 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 B3GALT4O96024 378 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TSFMP43897 325 aaKnown RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TFF3Q07654 80 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ACSM1Q08AH1 577 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 FABP9Q0Z7S8 132 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 PRAMEF17Q5VTA0 474 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 NOXRED1Q6NXP6 359 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TGIF2LXQ8IUE1 241 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 PRSS35Q8N3Z0 413 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ARIH2OSQ8N7S6 290 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 OR52N2Q8NGI0 321 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 COQ8AQ8NI60 647 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 COL26A1Q96A83 441 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ELMOD3Q96FG2 381 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TPD52L3Q96J77 140 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF681Q96N22 645 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TOLLIPQ9H0E2 274 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 RIMS4Q9H426 269 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 PLEKHA1Q9HB21 404 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM138Q9NPI0 162 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM184CQ9NVA4 438 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 VAPAQ9P0L0 249 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 POFUT2Q9Y2G5 429 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 BTBD17A6NE02 478 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 MED6O75586 246 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ETHE1O95571 254 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 MT-ND4LP03901 98 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 MGMTP16455 207 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 THBS2P35442 1172 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 BSGP35613 385 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 GDNFP39905 211 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 GLO1Q04760 184 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 SRSF4Q08170 494 aaKnown RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 GUSBP1Q15486 140 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 SPHARQ15513 63 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 SPDYE7PQ495Y7 208 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 MZT2AQ6P582 158 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ADGRE4PQ86SQ3 457 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TEX19Q8NA77 164 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 OR2L5Q8NG80 312 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 KCTD7Q96MP8 289 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 OR6C1Q96RD1 312 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 GSX1Q9H4S2 264 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 REEP4Q9H6H4 257 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 CHMP1AQ9HD42 196 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 THSD1Q9NS62 852 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM100Q9NV29 134 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 GFOD1Q9NXC2 390 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 RALYQ9UKM9 306 aaKnown RBP6.21□□□□□ -1.42
CSDE1-204ENST00000369530 PIEZO2Q9H5I5 2752 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 UNC13CQ8NB66 2214 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 IGF2RP11717 2491 aa6.21□□□□□ -1.42
CSDE1-204ENST00000369530 LRIT2A6NDA9 550 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 ZAR1LA6NP61 321 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 DISC1C4P0D8 188 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 H7BY64 318 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 FOXE1O00358 373 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-204ENST00000369530 RAB3DO95716 219 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 RPN2P04844 631 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 THBS1P07996 1170 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 GUSBP08236 651 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 NUDT7P0C024 238 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 PRPS2P11908 318 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 ADH7P40394 386 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 LIMS1P48059 325 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 PEA15Q15121 130 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 KCNMB1Q16558 191 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 NTRK2Q16620 822 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 CPTPQ5TA50 214 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM244Q5VVB8 128 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 OAFQ86UD1 273 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 LRRC28Q86X40 367 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF740Q8NDX6 193 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 OR5M3Q8NGP4 307 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 HUS1BQ8NHY5 278 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 C2CD4CQ8TF44 421 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 HIST1H2BAQ96A08 127 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 MS4A6EQ96DS6 147 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 PRAP1Q96NZ9 151 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 TSNAXQ99598 290 aaKnown RBP6.2□□□□□ -1.42
CSDE1-204ENST00000369530 NUDT9Q9BW91 350 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 SLC25A37Q9NYZ2 338 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 ZDHHC8Q9ULC8 765 aa6.2□□□□□ -1.42
CSDE1-204ENST00000369530 COLEC10Q9Y6Z7 277 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms