RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 THY1P04216 161 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 HIST1H2ABP04908 130 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 QDPRP09417 244 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 CFPP27918 469 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 TMEM33P57088 247 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 KLF3P57682 345 aaPredicted RBP8.84□□□□□ -0.99
CLRN3-201ENST00000368671 PCBP3P57721 371 aaKnown RBP8.84□□□□□ -0.99
CLRN3-201ENST00000368671 CLRN1P58418 232 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 MTPNP58546 118 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 SELENOVP59797 346 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 LMO4P61968 165 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 CCL8P80075 99 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 MYBPC1Q00872 1141 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 GLO1Q04760 184 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 RUNX1T1Q06455 604 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 ZP4Q12836 540 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 SELPLGQ14242 412 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 DUSP7Q16829 419 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 TBC1D28Q2M2D7 210 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 RUNDC3AQ59EK9 446 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 TMEM154Q6P9G4 183 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 LRFN4Q6PJG9 635 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 DEF8Q6ZN54 512 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 HIST3H2AQ7L7L0 130 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 SLC16A14Q7RTX9 510 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 PTOV1Q86YD1 416 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 RBM45Q8IUH3 476 aaKnown RBP8.84□□□□□ -0.99
CLRN3-201ENST00000368671 C11orf65Q8NCR3 313 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 OR4K5Q8NGD3 323 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 OR4D11Q8NGI4 311 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 SYNPRQ8TBG9 265 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 ADAMTS16Q8TE57 1224 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
CLRN3-201ENST00000368671 HIST1H2ACQ93077 130 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 SLC25A44Q96H78 314 aaPredicted RBP8.84□□□□□ -0.99
CLRN3-201ENST00000368671 PLA2G12AQ9BZM1 189 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 ZNF665Q9H7R5 613 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 HINT3Q9NQE9 182 aaKnown RBP8.84□□□□□ -0.99
CLRN3-201ENST00000368671 TAS2R5Q9NYW4 299 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 GPR160Q9UJ42 338 aa8.84□□□□□ -0.99
CLRN3-201ENST00000368671 LOC105371242A0A075B767 164 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 FMO6PO60774 539 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 SASH3O75995 380 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 LYPD3O95274 346 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 MPZL1O95297 269 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 BCL10O95999 233 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 PNPP00491 289 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 PGA4P0DJD7 388 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 PGA3P0DJD8 388 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 ATP4BP51164 291 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 ZNF84P51523 738 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 MRPS11P82912 194 aaKnown RBP8.83□□□□□ -1
CLRN3-201ENST00000368671 PLP2Q04941 152 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 SCGB2A2Q13296 93 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 TSTQ16762 297 aaKnown RBP8.83□□□□□ -1
CLRN3-201ENST00000368671 SLC36A2Q495M3 483 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 DLEU7Q6UYE1 221 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 NANOGNBQ7Z5D8 188 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 DHDDSQ86SQ9 333 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 LRRC18Q8N456 261 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 RBM15BQ8NDT2 890 aaKnown RBP8.83□□□□□ -1
CLRN3-201ENST00000368671 OR1J2Q8NGS2 313 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 SLC26A7Q8TE54 656 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 C11orf40Q8WZ69 217 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 GTF3AQ92664 365 aaKnown RBP8.83□□□□□ -1
CLRN3-201ENST00000368671 MCHR2Q969V1 340 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 ZNF347Q96SE7 839 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 C1orf198Q9H425 327 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 LEF1Q9UJU2 399 aaPredicted RBP8.83□□□□□ -1
CLRN3-201ENST00000368671 ZNF229Q9UJW7 825 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 PCDHB10Q9UN67 800 aa8.83□□□□□ -1
CLRN3-201ENST00000368671 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -1
CLRN3-201ENST00000368671 IGLV3-9A0A075B6K5 115 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 IGHV1-69-2A0A0G2JMI3 117 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 IQCMA0A1B0GVH7 501 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 TRAPPC13A5PLN9 417 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 MCIDASD6RGH6 385 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 BLOC1S5-TXNDC5H3BN57 136 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 PTHP01270 115 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 IGHG1P01857 330 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 F13BP05160 661 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 ANPEPP15144 967 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 ZNF250P15622 560 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 CD247P20963 164 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 EPHA1P21709 976 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 DRD4P21917 467 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 CCNOP22674 350 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 APLNRP35414 380 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 RAD52P43351 418 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 UCP2P55851 309 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 TEKQ02763 1124 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 HSF2Q03933 536 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 ACSM5Q6NUN0 579 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 USP51Q70EK9 711 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 ZNF771Q7L3S4 317 aaPredicted RBP8.82□□□□□ -1
CLRN3-201ENST00000368671 TSPYL5Q86VY4 417 aaPredicted RBP8.82□□□□□ -1
CLRN3-201ENST00000368671 SYT14Q8NB59 555 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 NOXO1Q8NFA2 376 aa8.82□□□□□ -1
CLRN3-201ENST00000368671 OR1J1Q8NGS3 322 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms