RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TREM2Q9NZC2 230 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 TRIM33Q9UPN9 1127 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 BLOC1S5-TXNDC5H3BN57 136 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 IGF2P01344 180 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 MT-ND1P03886 318 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 UMPSP11172 480 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 RAD52P43351 418 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 ZNF84P51523 738 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 UGT2B15P54855 530 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 UCP2P55851 309 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 KLF3P57682 345 aaPredicted RBP13.68□□□□□ -0.22
CKS1B-202ENST00000368436 CLRN1P58418 232 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 SELENOVP59797 346 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 RPL18Q07020 188 aaKnown RBP13.68□□□□□ -0.22
CKS1B-202ENST00000368436 NKPD1Q17RQ9 610 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 TBC1D28Q2M2D7 210 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 PCGF3Q3KNV8 242 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 ALKBH6Q3KRA9 238 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 NOXO1Q8NFA2 376 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 OR1J2Q8NGS2 313 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 OR51F2Q8NH61 342 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 ASB10Q8WXI3 467 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 C11orf40Q8WZ69 217 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 THOC1Q96FV9 657 aaKnown RBP13.68□□□□□ -0.22
CKS1B-202ENST00000368436 MAGEB18Q96M61 343 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 TSPAN32Q96QS1 320 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 BCL2L14Q9BZR8 327 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
CKS1B-202ENST00000368436 INTS9Q9NV88 658 aaKnown RBP13.68□□□□□ -0.22
CKS1B-202ENST00000368436 SLCO1C1Q9NYB5 712 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 GRIP1Q9Y3R0 1128 aa13.68□□□□□ -0.22
CKS1B-202ENST00000368436 IQCMA0A1B0GVH7 501 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 A0A1W2PRG6 482 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 TRMUO75648 421 aaKnown RBP13.67□□□□□ -0.22
CKS1B-202ENST00000368436 VENTXO95231 258 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 F13BP05160 661 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 LCKP06239 509 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 VIMP08670 466 aaKnown RBP13.67□□□□□ -0.22
CKS1B-202ENST00000368436 TSPAN19P0C672 248 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 ACADSP16219 412 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 FUT1P19526 365 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 RBM34P42696 430 aaKnown RBP13.67□□□□□ -0.22
CKS1B-202ENST00000368436 CRYBB2P43320 205 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 ERVS71-1P61550 626 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 PLP2Q04941 152 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 C10orf128Q5T292 105 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 TMEM154Q6P9G4 183 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 NKAIN4Q8IVV8 208 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
CKS1B-202ENST00000368436 RBM15BQ8NDT2 890 aaKnown RBP13.67□□□□□ -0.22
CKS1B-202ENST00000368436 ZFAND2BQ8WV99 257 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 LIPHQ8WWY8 451 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 LRRC37BQ96QE4 947 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 OR51B6Q9H340 312 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 NANOGQ9H9S0 305 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 LPAR2Q9HBW0 351 aa13.67□□□□□ -0.22
CKS1B-202ENST00000368436 TRAV20A0A0B4J274 112 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 FBP2O00757 339 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 OR7A10O76100 309 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 AQP2P41181 271 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 CCL8P80075 99 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 MRPS34P82930 218 aaKnown RBP13.66□□□□□ -0.22
CKS1B-202ENST00000368436 METTL21CQ5VZV1 264 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 NANOGP8Q6NSW7 305 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 HDDC2Q7Z4H3 204 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 CALHM3Q86XJ0 350 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 LRRC18Q8N456 261 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 SYT14Q8NB59 555 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 CPEB3Q8NE35 698 aaKnown RBP13.66□□□□□ -0.22
CKS1B-202ENST00000368436 SEMA6DQ8NFY4 1073 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 SNX33Q8WV41 574 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 NMD3Q96D46 503 aaKnown RBP13.66□□□□□ -0.22
CKS1B-202ENST00000368436 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
CKS1B-202ENST00000368436 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
CKS1B-202ENST00000368436 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 SIAEQ9HAT2 523 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 INIPQ9NRY2 104 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 RIMS3Q9UJD0 308 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 UGT2A1Q9Y4X1 527 aa13.66□□□□□ -0.22
CKS1B-202ENST00000368436 NPIPB13A6NJU9 1138 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 NPIPB4C9JG80 1138 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 CDC14BO60729 498 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 OR5F1O95221 314 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 IGHV3-13P01766 116 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 ANPEPP15144 967 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 DAP3P51398 398 aaKnown RBP13.65□□□□□ -0.22
CKS1B-202ENST00000368436 TAS2R41P59536 307 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 TEKQ02763 1124 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
CKS1B-202ENST00000368436 MOGQ16653 247 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 PABPC1L2AQ5JQF8 200 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 OR1J1Q8NGS3 322 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 TMEM255BQ8WV15 326 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 TMEM239Q8WW34 195 aa13.65□□□□□ -0.22
CKS1B-202ENST00000368436 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms