RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TXNIPQ9H3M7 391 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 CHST11Q9NPF2 352 aa10.82□□□□□ -0.68
USF1-203ENST00000368021 RPH3AQ9Y2J0 694 aaPredicted RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 KLF13Q9Y2Y9 288 aaPredicted RBP10.82□□□□□ -0.68
USF1-203ENST00000368021 A0A1W2PNV4 684 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 GJE1A6NN92 205 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ATXN7O15265 892 aaPredicted RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 NME2P1O60361 137 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 PMS2P2O95744 297 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 IGHA1P01876 353 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ADRA2AP08913 450 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 MYL12AP19105 171 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 NME2P22392 152 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 AHCYP23526 432 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 OR2B6P58173 313 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 LGALS3BPQ08380 585 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ZNF239Q16600 458 aaKnown RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 TMEM176BQ3YBM2 270 aaPredicted RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 IGFL2Q6UWQ7 119 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ZNF367Q7RTV3 350 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 JAZF1Q86VZ6 243 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 PROKR2Q8NFJ6 384 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 FDCSPQ8NFU4 85 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ZFAND1Q8TCF1 268 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 DNAJA3Q96EY1 480 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 OR5B2Q96R09 309 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 NMNAT3Q96T66 252 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 MND1Q9BWT6 205 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 MED20Q9H944 212 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 PLA2G3Q9NZ20 509 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 B4GALT7Q9UBV7 327 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 RELNP78509 3460 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 PINLYPA6NC86 204 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 LINC00862A6NCI5 91 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 OR6C68A6NDL8 312 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 C11orf98E9PRG8 122 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 LINC01387J3KSC0 135 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 J3QRE1 110 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 SNAPC5O75971 98 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 PTHP01270 115 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 LCKP06239 509 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 SP1P08047 785 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 RFPL3SP0C7P2 107 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 CD46P15529 392 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 CDKN2AP42771 156 aaKnown RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 SLC25A1P53007 311 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 B3GALT5-AS1P59052 145 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 RPL27P61353 136 aaKnown RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 POU4F2Q12837 409 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 KLHL12Q53G59 568 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 MESTQ5EB52 335 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 SLC35D3Q5M8T2 416 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 SLC25A25Q6KCM7 469 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 TMPPEQ6ZT21 453 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 PXKQ7Z7A4 578 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 SULF2Q8IWU5 870 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ARIH2OSQ8N7S6 290 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 ZNF519Q8TB69 540 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 RACGAP1Q9H0H5 632 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 OR51V1Q9H2C8 321 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 TMEM185BQ9H7F4 350 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 ZNF703Q9H7S9 590 aaPredicted RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 EIF3KQ9UBQ5 218 aaKnown RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 ZNF346Q9UL40 294 aaKnown RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 EXOSC1Q9Y3B2 195 aaKnown RBP10.81□□□□□ -0.68
USF1-203ENST00000368021 AUP1Q9Y679 476 aa10.81□□□□□ -0.68
USF1-203ENST00000368021 A0A1W2PRG6 482 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 MKRN2OSH3BPM6 223 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 KLRC4-KLRK1H3BQV0 150 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 TRIM77I1YAP6 450 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 XKRYO14609 159 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 SEC14L5O43304 696 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 CEACAM4O75871 244 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 PDGFAP04085 211 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 BMP4P12644 408 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 GDF1P27539 372 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 PSMB9P28065 219 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 SHC1P29353 583 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 SFTPDP35247 375 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 ATP6V1E1P36543 226 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 ETV6P41212 452 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 DIO1P49895 249 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
USF1-203ENST00000368021 SLC35A1P78382 337 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 ARG2P78540 354 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 GGTLC2Q14390 218 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 TOMM20Q15388 145 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 ACKR1Q16570 336 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 HYAL4Q2M3T9 481 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 LCN1P1Q5VSP4 162 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 LEG1Q6P5S2 330 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 PAQR6Q6TCH4 344 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 ZNF782Q6ZMW2 699 aaPredicted RBP10.8□□□□□ -0.68
USF1-203ENST00000368021 TCTE3Q8IZS6 198 aa10.8□□□□□ -0.68
USF1-203ENST00000368021 NANOGP1Q8N7R0 232 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms