RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RPP14O95059 124 aaKnown RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 PAHP00439 452 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 KLK3P07288 261 aaPredicted RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 KCNJ8Q15842 424 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 TATDN3Q17R31 274 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ATAD3CQ5T2N8 411 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 TIGD3Q6B0B8 471 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 MRPL14Q6P1L8 145 aaKnown RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 IL20RBQ6UXL0 311 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 LSRQ86X29 649 aaPredicted RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 ZNF676Q8N7Q3 588 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 AGBL5Q8NDL9 886 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ADPRHL1Q8NDY3 354 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 SLC7A6Q92536 515 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 OR8B4Q96RC9 309 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ABCG5Q9H222 651 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 NEK6Q9HC98 313 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 ZNF275Q9NSD4 429 aaPredicted RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 ALKBH4Q9NXW9 302 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 KLHDC2Q9Y2U9 406 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 AK6Q9Y3D8 172 aaKnown RBP12.62□□□□□ -0.39
USF1-202ENST00000368020 CACNG2Q9Y698 323 aa12.62□□□□□ -0.39
USF1-202ENST00000368020 IGLV1-36A0A0B4J1U3 117 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 NPIPA5E9PKD4 350 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 ZNF593O00488 134 aaPredicted RBP12.61□□□□□ -0.39
USF1-202ENST00000368020 TP53I11O14683 189 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 TM4SF5O14894 197 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 SLC16A7O60669 478 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 DKK1O94907 266 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 SNRPBP14678 240 aaKnown RBP12.61□□□□□ -0.39
USF1-202ENST00000368020 CFPP27918 469 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 AP3S2P59780 193 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 SNTA1Q13424 505 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 NTRK2Q16620 822 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 TBRG1Q3YBR2 411 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 SLC22A10Q63ZE4 541 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
USF1-202ENST00000368020 TOMM5Q8N4H5 51 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 LGALS14Q8TCE9 139 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
USF1-202ENST00000368020 TRAF4Q9BUZ4 470 aaPredicted RBP12.61□□□□□ -0.39
USF1-202ENST00000368020 METTL7AQ9H8H3 244 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 CHST11Q9NPF2 352 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 PISDQ9UG56 409 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 NPIPA1Q9UND3 350 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
USF1-202ENST00000368020 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
USF1-202ENST00000368020 PIEZO1Q92508 2521 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 LOC102723996A0A087X1L8 192 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 A0A1W2PNV4 684 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 A0A1W2PPK0 400 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 ACOD1A6NK06 481 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 TMEM200CA6NKL6 621 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 PRR32B1ATL7 298 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 C9J4A7 227 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 PIN1P1O15428 100 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
USF1-202ENST00000368020 CD63P08962 238 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 DYRK1AQ13627 763 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 SLC17A1Q14916 467 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 EXT1Q16394 746 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 CDCP2Q5VXM1 449 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 STAC2Q6ZMT1 411 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 UBASH3BQ8TF42 649 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 SLC25A43Q8WUT9 341 aaPredicted RBP12.6□□□□□ -0.39
USF1-202ENST00000368020 SMIM4Q8WVI0 70 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 RGP1Q92546 391 aaPredicted RBP12.6□□□□□ -0.39
USF1-202ENST00000368020 S100A16Q96FQ6 103 aaKnown RBP12.6□□□□□ -0.39
USF1-202ENST00000368020 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 C4orf45Q96LM5 186 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 ABHD1Q96SE0 405 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 DPAGT1Q9H3H5 408 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 NLKQ9UBE8 527 aa12.6□□□□□ -0.39
USF1-202ENST00000368020 COL27A1Q8IZC6 1860 aaPredicted RBP12.6□□□□□ -0.39
USF1-202ENST00000368020 TRBV5-7A0A0A0MS05 114 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 TRABD2BA6NFA1 517 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ANXA2P2A6NMY6 339 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 PSMD9O00233 223 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 EEF1E1O43324 174 aaKnown RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 AQP8O94778 261 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 DHFRP00374 187 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 PLGP00747 810 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 HRGP04196 525 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ANXA2P07355 339 aaKnown RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 ADH6P28332 368 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 MNDAP41218 407 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 EIF1P41567 113 aaKnown RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 RAG2P55895 527 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ADAM8P78325 824 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 TLE3Q04726 772 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms