RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 GLYATL3Q5SZD4 288 aa16.99■□□□□ 0.31
CLIP2-202ENST00000361545 PARP16Q8N5Y8 322 aa16.99■□□□□ 0.31
CLIP2-202ENST00000361545 DMBX1Q8NFW5 382 aa16.99■□□□□ 0.31
CLIP2-202ENST00000361545 CENPOQ9BU64 300 aa16.99■□□□□ 0.31
CLIP2-202ENST00000361545 OR2B2Q9GZK3 357 aa16.99■□□□□ 0.31
CLIP2-202ENST00000361545 MT-CO3P00414 261 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 SYT9Q86SS6 491 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 PPA2Q9H2U2 334 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 MED29Q9NX70 200 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 PROCRQ9UNN8 238 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 EFSO43281 561 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 MT-CO2P00403 227 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 HCCSP53701 268 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 KDM4DQ6B0I6 523 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 OR4N2Q8NGD1 307 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 TEAD3Q99594 435 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 PDCD1LG2Q9BQ51 273 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 ZNF346Q9UL40 294 aaKnown RBP16.98■□□□□ 0.31
CLIP2-202ENST00000361545 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 KNTC1P50748 2209 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 HRO43593 1189 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 RPL23AP62750 156 aaKnown RBP16.98■□□□□ 0.31
CLIP2-202ENST00000361545 FGFBP1Q14512 234 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 SFXN4Q6P4A7 337 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 FAM198BQ6UWH4 519 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 LIN7BQ9HAP6 207 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 A0A087WV62 115 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 TNFSF11O14788 317 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 HIST1H1CP16403 213 aaKnown RBP16.98■□□□□ 0.31
CLIP2-202ENST00000361545 EMDP50402 254 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 ESCO2Q56NI9 601 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 ELP2Q6IA86 826 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 WFDC8Q8IUA0 241 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 SLC22A11Q9NSA0 550 aa16.98■□□□□ 0.31
CLIP2-202ENST00000361545 LRRC30A6NM36 301 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 PRAF2O60831 178 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 PAHP00439 452 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 ZNF26P17031 533 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-202ENST00000361545 AGFG1P52594 562 aaKnown RBP16.97■□□□□ 0.31
CLIP2-202ENST00000361545 YBX1P67809 324 aaKnown RBP16.97■□□□□ 0.31
CLIP2-202ENST00000361545 C12orf45Q8N5I9 185 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-202ENST00000361545 RHOXF1Q8NHV9 184 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 IKZF5Q9H5V7 419 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 UFSP2Q9NUQ7 469 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 SLC5A6Q9Y289 635 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 FIGNL2A6NMB9 653 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 SLC16A6O15403 523 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 SLC2A10O95528 541 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 SBK3P0C264 359 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 PNLIPRP2P54317 469 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 DNAJC5GQ8N7S2 189 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 SCCPDHQ8NBX0 429 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 RNF170Q96K19 258 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 CPNE5Q9HCH3 593 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 B3GAT1Q9P2W7 334 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 NDRG4Q9ULP0 352 aaKnown RBP16.97■□□□□ 0.31
CLIP2-202ENST00000361545 A0A1B0GVG6 124 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 TUSC2O75896 110 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 S100PP25815 95 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 OR51D1Q8NGF3 324 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 FAM117AQ9C073 453 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 GFOD1Q9NXC2 390 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 PLA2G3Q9NZ20 509 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.97■□□□□ 0.31
CLIP2-202ENST00000361545 PDZD9Q8IXQ8 264 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 EXD3Q8N9H8 876 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 KCNE4Q8WWG9 221 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 OR2A14Q96R47 310 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 MED18Q9BUE0 208 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 PBDC1Q9BVG4 233 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 ZNF355PQ9NSJ1 428 aa16.97■□□□□ 0.31
CLIP2-202ENST00000361545 CXorf51AA0A1B0GTR3 108 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 FUOMA2VDF0 154 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 NKX6-3A6NJ46 265 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 APOC3P02656 99 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 MRPL19P49406 292 aaKnown RBP16.96■□□□□ 0.31
CLIP2-202ENST00000361545 RPL18Q07020 188 aaKnown RBP16.96■□□□□ 0.31
CLIP2-202ENST00000361545 TRILQ7L0X0 811 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 LIMS2Q7Z4I7 341 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ADAM23O75077 832 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 YIF1BQ5BJH7 314 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ADGRF3Q8IZF5 1079 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ST8SIA1Q92185 356 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ALG14Q96F25 216 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 HRASLSQ9HDD0 168 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ATP23Q9Y6H3 246 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 IGHV5-51A0A0C4DH38 117 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 CELA2BP08218 269 aaPredicted RBP16.96■□□□□ 0.31
CLIP2-202ENST00000361545 CATR1Q13166 79 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 LAX1Q8IWV1 398 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ZNF679Q8IYX0 411 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 SLC43A2Q8N370 569 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 CGGBP1Q9UFW8 167 aaPredicted RBP16.96■□□□□ 0.31
CLIP2-202ENST00000361545 FRG2CA6NGY1 282 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 ZNF195O14628 629 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 P2RX6O15547 441 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 GSTP1P09211 210 aaKnown RBP16.96■□□□□ 0.31
CLIP2-202ENST00000361545 FOLR1P15328 257 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 NFYBP25208 207 aa16.96■□□□□ 0.31
CLIP2-202ENST00000361545 SLC22A25Q6T423 547 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms