RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 UMAD1C9J7I0 102 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 H0YGG7 62 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 FOLR1P15328 257 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 CD80P33681 288 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 DIO1P49895 249 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 IRF3Q14653 427 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 OR5L2Q8NGL0 311 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 FGGYQ96C11 551 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 DERL3Q96Q80 235 aa12.81□□□□□ -0.36
SMC5-201ENST00000361138 A0A1W2PR48 441 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 STMND1H3BQB6 276 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 FZD6O60353 706 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 SLC6A1P30531 599 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 SNRPNP63162 240 aaKnown RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 TIAL1Q01085 375 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMC5-201ENST00000361138 FAM26DQ5JW98 314 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 IL17RCQ8NAC3 791 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 RNF170Q96K19 258 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 SPACA1Q9HBV2 294 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 OR52A1Q9UKL2 312 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 TRAV36DV7A0A075B6V5 113 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 TRAV20A0A0B4J274 112 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 NME2P1O60361 137 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 PVRP15151 417 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 ZNF79Q15937 498 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 OR5B2Q96R09 309 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 SDF2Q99470 211 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 FN3KRPQ9HA64 309 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 C19orf12Q9NSK7 152 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 GPR137BO60478 399 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 IL33O95760 270 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 NID1P14543 1247 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 CEBPBP17676 345 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 POLR2HP52434 150 aaKnown RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 ZP2Q05996 745 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 CPNE4Q96A23 557 aaPredicted RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 C19orf43Q9BQ61 176 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 ZDHHC5Q9C0B5 715 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 ZNF286AQ9HBT8 521 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 VDAC3Q9Y277 283 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 FITM1A5D6W6 292 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 FAM221BA6H8Z2 402 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 OR6C6A6NF89 314 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 RAB13P51153 203 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 GPNMBQ14956 572 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 ZNF74Q16587 644 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 MCATQ8IVS2 390 aaKnown RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 ELF4Q99607 663 aaPredicted RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 PARP12Q9H0J9 701 aaKnown RBP12.8□□□□□ -0.36
SMC5-201ENST00000361138 TUBG2Q9NRH3 451 aa12.8□□□□□ -0.36
SMC5-201ENST00000361138 CCDC163A0A0D9SF12 145 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 NDUFB6O95139 128 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 OMGP23515 440 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 MAP2K6P52564 334 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 PLP2Q04941 152 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 ZNF266Q14584 549 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 GPR137CQ8N3F9 429 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 OR56B2PQ8NGI1 322 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 RAB39BQ96DA2 213 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 TMEM235A6NFC5 223 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 A8MXE2 369 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 LCATP04180 440 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 FABP1P07148 127 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 PTAFRP25105 342 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 RABIFP47224 123 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 POU3F1Q03052 451 aaPredicted RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 SSBP1Q04837 148 aaKnown RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 BAP18Q8IXM2 172 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 C12orf76Q8N812 135 aaPredicted RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 RSPRY1Q96DX4 576 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 METTL9Q9H1A3 318 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 MAN2B1O00754 1011 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 TO15178 435 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 XRCC3O43542 346 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 IRS1P35568 1242 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 ZNF93P35789 620 aaPredicted RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 CASRP41180 1078 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 EFNA3P52797 238 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 ZNF362Q5T0B9 420 aaPredicted RBP12.79□□□□□ -0.36
SMC5-201ENST00000361138 Q96M85 177 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 ARHGDIGQ99819 225 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 C1orf198Q9H425 327 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 TM7SF3Q9NS93 570 aa12.79□□□□□ -0.36
SMC5-201ENST00000361138 FCGR2AP12318 317 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms