RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CTXN1P60606 82 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CDK5Q00535 292 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 REEP5Q00765 189 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF787Q6DD87 383 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR51A4Q8NGJ6 313 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR13D1Q8NGV5 346 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZDHHC4Q9NPG8 344 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 DCAF16Q9NXF7 216 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MED16Q9Y2X0 877 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZFP92A6NM28 416 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF74Q16587 644 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 BRICD5Q6PL45 260 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 KCNG3Q8TAE7 436 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MS4A10Q96PG2 267 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 DEC1Q9P2X7 70 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 V9GYH0 126 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 FAM183AA6NL82 134 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PSMB3P49720 205 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 B2MP61769 119 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TRA2BP62995 288 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 RAB31Q13636 194 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ARHGAP19Q14CB8 494 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TUSC1Q2TAM9 212 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM244Q5VVB8 128 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 FIP1L1Q6UN15 594 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MBOAT2Q6ZWT7 520 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 L3MBTL4Q8NA19 623 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 DNAJA3Q96EY1 480 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 JSRP1Q96MG2 331 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TEX101Q9BY14 249 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GCM1Q9NP62 436 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TUBGCP6Q96RT7 1819 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 LINC00587B1AMM8 73 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PDGFBP01127 241 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SCGB2A2Q13296 93 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PDGFRLQ15198 375 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 IER5LQ5T953 404 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 FBXW12Q6X9E4 464 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CBARPQ8N350 705 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZFP62Q8NB50 900 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR8U1Q8NH10 309 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CHAC2Q8WUX2 184 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR8D2Q9GZM6 311 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 IKZF5Q9H5V7 419 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF286AQ9HBT8 521 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SPATA6Q9NWH7 488 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GLTPD2A6NH11 291 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ST8SIA5O15466 376 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PTGFRP43088 359 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SIM1P81133 766 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 DPH7Q9BTV6 452 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 A0A0U1RQS6 177 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 HRO43593 1189 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 PEX10O60683 326 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 F2P00734 622 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SLC35A1P78382 337 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 MEX3BQ6ZN04 569 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF596Q8TC21 504 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SH3RF2Q8TEC5 729 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 FAM210BQ96KR6 192 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CWH43Q9H720 699 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 SLC25A19Q9HC21 320 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 KCMF1Q9P0J7 381 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 JTBO76095 146 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 HOXB9P17482 250 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 FCGR2CP31995 323 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 GUK1Q16774 197 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 CCDC116Q8IYX3 515 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR14C36Q8NHC7 312 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 TOE1Q96GM8 510 aaKnown RBP5.61□□□□□ -1.51
VPS13B-203ENST00000358544 C11orf49Q9H6J7 331 aa5.61□□□□□ -1.51
VPS13B-203ENST00000358544 OR6C68A6NDL8 312 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 FOXE1O00358 373 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PLRG1O43660 514 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF728P0DKX0 622 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PNMTP11086 282 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 EMP2P54851 167 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RPS15AP62244 130 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RPP30P78346 268 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF79Q15937 498 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PTOV1Q86YD1 416 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ARL14EPQ8N8R7 260 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RBM14Q96PK6 669 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 CCDC187A0A096LP49 1063 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 A0A1W2PPQ1 181 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 NHLH2Q02577 135 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TPGS2Q68CL5 300 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 LGI3Q8N145 548 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TSLPQ969D9 159 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ADIPOR1Q96A54 375 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 SMIM7Q9BQ49 75 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PDLIM7Q9NR12 457 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 IL17CQ9P0M4 197 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 GABRR1P24046 479 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 GBX1Q14549 363 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 CDRT4Q8N9R6 151 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RXFP4Q8TDU9 374 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 NEIL2Q969S2 332 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 SMIM14Q96QK8 99 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 HINT3Q9NQE9 182 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms