RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 KLK3P07288 261 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 OR2T7P0C7T2 308 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF3P17036 446 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 SDHBP21912 280 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 PTH2RP49190 550 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 NOVA1P51513 510 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 FHL1Q13642 323 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 HLXQ14774 488 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 IZUMO1Q8IYV9 350 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 OR13C2Q8NGS9 318 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 OR2T27Q8NH04 317 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 SEC22CQ9BRL7 303 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 MRI1Q9BV20 369 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 OR8D2Q9GZM6 311 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 CACYBPQ9HB71 228 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 NOX3Q9HBY0 568 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 FOXJ2Q9P0K8 574 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 FBXL4Q9UKA2 621 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 DTX4Q9Y2E6 619 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 IFITM5A6NNB3 132 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 C9orf172C9J069 976 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 PROB1E7EW31 1015 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 PIN1P1O15428 100 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 GPRIN2O60269 458 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 SUSD5O60279 629 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 CBX7O95931 251 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 HIST1H2ABP04908 130 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 DBIP07108 87 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 HEXBP07686 556 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 NID1P14543 1247 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 PTNP21246 168 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 DBPQ10586 325 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 BTN1A1Q13410 526 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 GPR68Q15743 365 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 TP53I3Q53FA7 332 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 APOOLQ6UXV4 268 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 HIST3H2AQ7L7L0 130 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 LINGO2Q7L985 606 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 LSRQ86X29 649 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 CDK20Q8IZL9 346 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF619Q8N2I2 560 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 RFLNBQ8N5W9 214 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 POMGNT2Q8NAT1 580 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF671Q8TAW3 534 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 SMAP2Q8WU79 429 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 CNOT9Q92600 299 aaKnown RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 HIST1H2ACQ93077 130 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 C8orf44Q96CB5 159 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 CXorf58Q96LI9 332 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 C1QTNF6Q9BXI9 259 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 MEPEQ9NQ76 525 aaPredicted RBP11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 ZFHX4Q86UP3 3567 aa11.48□□□□□ -0.57
RTFDC1-202ENST00000357348 CCDC187A0A096LP49 1063 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF879B4DU55 563 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 B4E171 279 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PDCD5O14737 125 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 CREBL2O60519 120 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 RGS11O94810 467 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 NDUFB6O95139 128 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 ICAM2P13598 275 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 POU3F2P20265 443 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 TSPAN7P41732 249 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 FHL5Q5TD97 284 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 ARHGAP11AQ6P4F7 1023 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 BVESQ8NE79 360 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PTPMT1Q8WUK0 201 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PNPLA2Q96AD5 504 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 SGTBQ96EQ0 304 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 LIN37Q96GY3 246 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 DERL3Q96Q80 235 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 CHIAQ9BZP6 476 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 EVA1AQ9H8M9 152 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 GPN1Q9HCN4 374 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 MRPL15Q9P015 296 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 FOXJ3Q9UPW0 622 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 MED31Q9Y3C7 131 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PTPRBP23467 1997 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 A0A1W2PPK0 400 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 TNFSF15O95150 251 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 RAB40ALP0C0E4 278 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 GABRA1P14867 456 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 SRMP19623 302 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 S1PR1P21453 382 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 S100A11P31949 105 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 SLC16A1P53985 500 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 SEC61A1P61619 476 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PLAURQ03405 335 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 LINC00303Q3SY05 128 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 OR5M10Q6IEU7 315 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF613Q6PF04 617 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 TIPARPQ7Z3E1 657 aaKnown RBP11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 FCAMRQ8WWV6 532 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 RAB40AQ8WXH6 277 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 PMM1Q92871 262 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
RTFDC1-202ENST00000357348 TAAR9Q96RI9 348 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms