RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TIMM9Q9Y5J7 89 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 KIAA1217Q5T5P2 1943 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 ZNF749O43361 778 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 SSSCA1O60232 199 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 GPR32O75388 356 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 SARGQ9BW04 601 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 RCE1Q9Y256 329 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 METTL15A6NJ78 407 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 CSF3P09919 207 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 SULT1A3P0DMM9 295 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 SULT1A4P0DMN0 295 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 GLRA1P23415 457 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 LTB4RQ15722 352 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 DEFB123Q8N688 67 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 CDCA3Q99618 268 aaPredicted RBP15.94■□□□□ 0.14
COL27A1-201ENST00000356083 LRRC3CA6NJW4 275 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 GATCO43716 136 aaKnown RBP15.94■□□□□ 0.14
COL27A1-201ENST00000356083 TMEM268Q5VZI3 342 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 TMEM207Q6UWW9 146 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 PLPP7Q8NBV4 271 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 OR14A16Q8NHC5 309 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 STACQ99469 402 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 KIF26BQ2KJY2 2108 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 ALPK2Q86TB3 2170 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 SLC15A4Q8N697 577 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 TRUB1Q8WWH5 349 aaKnown RBP15.94■□□□□ 0.14
COL27A1-201ENST00000356083 CHST6Q9GZX3 395 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 WDR76Q9H967 626 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 FZR1Q9UM11 496 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 ZNF93P35789 620 aaPredicted RBP15.93■□□□□ 0.14
COL27A1-201ENST00000356083 ZNF280AP59817 542 aaPredicted RBP15.93■□□□□ 0.14
COL27A1-201ENST00000356083 NXNL2Q5VZ03 156 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 LYPD4Q6UWN0 246 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 POFUT1Q9H488 388 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 MED12Q93074 2177 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 DBPQ10586 325 aaPredicted RBP15.93■□□□□ 0.14
COL27A1-201ENST00000356083 TMEM65Q6PI78 240 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 RANBP10Q6VN20 620 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 TIFABQ6ZNK6 161 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 FAM71CQ8NEG0 241 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 SLC7A13Q8TCU3 470 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 DTD2Q96FN9 168 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 ZDHHC18Q9NUE0 388 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 MED9Q9NWA0 146 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 PLAURQ03405 335 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 PRTGQ2VWP7 1150 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 CDK5R2Q13319 367 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 SVBPQ8N300 66 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 APH1BQ8WW43 257 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 ST8SIA4Q92187 359 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 PLPPR2Q96GM1 343 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 NMNAT3Q96T66 252 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 ACSS1Q9NUB1 689 aaPredicted RBP15.93■□□□□ 0.14
COL27A1-201ENST00000356083 EXO1Q9UQ84 846 aaKnown RBP15.93■□□□□ 0.14
COL27A1-201ENST00000356083 GAMTQ14353 236 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 SOHLH1Q5JUK2 328 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 NOX4Q9NPH5 578 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 OR52A1Q9UKL2 312 aa15.93■□□□□ 0.14
COL27A1-201ENST00000356083 PPIHO43447 177 aaKnown RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 OPRL1P41146 370 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 GTDC1Q4AE62 458 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 AVPI1Q5T686 147 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 Q6ZPB1 254 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 MOB1BQ7L9L4 216 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 NXF2Q9GZY0 626 aaKnown RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 TNFSF15O95150 251 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 NPY4RP50391 375 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 RAB7AP51149 207 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 BTNL8Q6UX41 500 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 MEIKINA0A087WXM9 373 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 RNASE1P07998 156 aaKnown RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 PCBP3P57721 371 aaKnown RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 OR10K2Q6IF99 312 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 TP53INP2Q8IXH6 220 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 OR56B1Q8NGI3 324 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 SIGLEC10Q96LC7 697 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 SIRPB1O00241 398 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 OR8B4Q96RC9 309 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 BMPR1BO00238 502 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 HAGHQ16775 308 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 PLAG1Q6DJT9 500 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 ANKLE1Q8NAG6 615 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 CA5BP1Q8WTZ4 195 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 NRSN2Q9GZP1 204 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 TAS2R5Q9NYW4 299 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 DNMT3BQ9UBC3 853 aaKnown RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 PPT2Q9UMR5 302 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 POMT1Q9Y6A1 747 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 GJB3O75712 270 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 IMPA1P29218 277 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 FNDC8Q8TC99 324 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 SMAP2Q8WU79 429 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 LCORQ96JN0 433 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 SLC12A9Q9BXP2 914 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 METTL17Q9H7H0 456 aaPredicted RBP15.92■□□□□ 0.14
COL27A1-201ENST00000356083 PLEKHF2Q9H8W4 249 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 MMACHCQ9Y4U1 282 aa15.92■□□□□ 0.14
COL27A1-201ENST00000356083 M0QYG6 137 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms