RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LPCAT4Q643R3 524 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 ACSM5Q6NUN0 579 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 SLC25A47Q6Q0C1 308 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 CCDC36Q8IYA8 594 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 NPEPL1Q8NDH3 523 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 HSD17B8Q92506 261 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 S100PBPQ96BU1 408 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 MUCL1Q96DR8 90 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 PLEKHA8Q96JA3 519 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 RDH12Q96NR8 316 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 RIBC2Q9H4K1 309 aa13.65□□□□□ -0.22
TRIM13-201ENST00000356017 USP9XQ93008 2570 aaPredicted RBP13.65□□□□□ -0.22
TRIM13-201ENST00000356017 OR5H1A6NKK0 313 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 C19orf84I3L1E1 186 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SLC16A7O60669 478 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SLC2A10O95528 541 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 NPR2P20594 1047 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 PAICSP22234 425 aaKnown RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 PAX7P23759 505 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 TMEM236Q5W0B7 351 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 DMRTC2Q8IXT2 367 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SDR9C7Q8NEX9 313 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 NSMAFQ92636 917 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 BCL2L2Q92843 193 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SPOCK3Q9BQ16 436 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 MED18Q9BUE0 208 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 NUAK2Q9H093 628 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 OBP2BQ9NPH6 170 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 FKBP7Q9Y680 259 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 OR6C68A6NDL8 312 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SURF4O15260 269 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 KHDRBS3O75525 346 aaKnown RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 FARS2O95363 451 aaKnown RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 KIR2DL3P43628 341 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 MRPS34P82930 218 aaKnown RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SNAPC1Q16533 368 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SLX4IPQ5VYV7 408 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 KLHL24Q6TFL4 600 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 GALNT4Q8N4A0 578 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 ACBD4Q8NC06 268 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 OR2T4Q8NH00 348 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 DACH2Q96NX9 599 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 DDOQ99489 341 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 GRIP2Q9C0E4 1043 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 MOV10Q9HCE1 1003 aaKnown RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 RPRD1BQ9NQG5 326 aaKnown RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 TMEM38BQ9NVV0 291 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 SMPD3Q9NY59 655 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-201ENST00000356017 ZNF226Q9NYT6 803 aa13.64□□□□□ -0.23
TRIM13-201ENST00000356017 FREM1Q5H8C1 2179 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 IGKV1D-43A0A0B4J1Z2 117 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 SH3D21A4FU49 640 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 ATP6V1G2O95670 118 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 WNT11O96014 354 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 OR8G3PP0DMU2 310 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 B4GALT1P15291 398 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 CTLA4P16410 223 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 EPHA2P29317 976 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 POLR2IP36954 125 aaKnown RBP13.63□□□□□ -0.23
TRIM13-201ENST00000356017 UBE2NP61088 152 aaKnown RBP13.63□□□□□ -0.23
TRIM13-201ENST00000356017 GLO1Q04760 184 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 CRMP1Q14194 572 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 ZIK1Q3SY52 487 aaPredicted RBP13.63□□□□□ -0.23
TRIM13-201ENST00000356017 TBRG1Q3YBR2 411 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 SP5Q6BEB4 398 aaPredicted RBP13.63□□□□□ -0.23
TRIM13-201ENST00000356017 ZBTB46Q86UZ6 589 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 OR6V1Q8N148 313 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 SLC22A24Q8N4F4 322 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 HRASLS5Q96KN8 279 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 WFIKKN1Q96NZ8 548 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 RACGAP1Q9H0H5 632 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 VCX3BQ9H321 246 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 FN3KQ9H479 309 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 TOR3AQ9H497 397 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 RERGLQ9H628 205 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 SIAEQ9HAT2 523 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 SRA1Q9HD15 236 aaKnown RBP13.63□□□□□ -0.23
TRIM13-201ENST00000356017 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 TVP23BQ9NYZ1 205 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
TRIM13-201ENST00000356017 B9D1Q9UPM9 204 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 AMDHD2Q9Y303 409 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 ALPK2Q86TB3 2170 aa13.63□□□□□ -0.23
TRIM13-201ENST00000356017 TENM4Q6N022 2769 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 FASNP49327 2511 aaKnown RBP13.62□□□□□ -0.23
TRIM13-201ENST00000356017 A0A096LPE4 126 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 A0A1W2PPZ6 126 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 CASKO14936 926 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 LAP3P28838 519 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 SLC25A1P53007 311 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 CDC42P60953 191 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 HIKESHIQ53FT3 197 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 C12orf73Q69YU5 71 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 MEX3BQ6ZN04 569 aaKnown RBP13.62□□□□□ -0.23
TRIM13-201ENST00000356017 DPPA2Q7Z7J5 298 aa13.62□□□□□ -0.23
TRIM13-201ENST00000356017 GLB1L2Q8IW92 636 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms