RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 GPR139Q6DWJ6 353 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-201ENST00000355430 MFRPQ9BY79 579 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 CCDC86Q9H6F5 360 aaKnown RBP11.27□□□□□ -0.6
COLCA1-201ENST00000355430 C19orf53Q9UNZ5 99 aaPredicted RBP11.27□□□□□ -0.6
COLCA1-201ENST00000355430 ETV7Q9Y603 341 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 GON4LQ3T8J9 2241 aa11.27□□□□□ -0.6
COLCA1-201ENST00000355430 H7C417 338 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 M0QYG6 137 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 DPP4P27487 766 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 TACR3P29371 465 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 IRF3Q14653 427 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 Q96M85 177 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 STACQ99469 402 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ST6GALNAC5Q9BVH7 336 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 WDR76Q9H967 626 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 DAPP1Q9UN19 280 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ADAM18Q9Y3Q7 739 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ANKRD61A6NGH8 418 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 TRIM64A6NGJ6 449 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 KRBOX1C9JBD0 128 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 GLCEO94923 617 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 F10P00742 488 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 TP53P04637 393 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-201ENST00000355430 RAB3AP20336 220 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 CDK2P24941 298 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 EIF1P41567 113 aaKnown RBP11.27□□□□□ -0.61
COLCA1-201ENST00000355430 RAB5BP61020 215 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 C17orf67Q0P5P2 114 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 HES3Q5TGS1 186 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 TRAPPC6BQ86SZ2 158 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 PATE1Q8WXA2 126 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 GCDHQ92947 438 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-201ENST00000355430 SARAFQ96BY9 339 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ARHGDIGQ99819 225 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 SLC6A20Q9NP91 592 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 REV1Q9UBZ9 1251 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 KCNIP3Q9Y2W7 256 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 AGPAT2O15120 278 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 CRYABP02511 175 aaKnown RBP11.27□□□□□ -0.61
COLCA1-201ENST00000355430 LIMS3P0CW19 117 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 LIMS4P0CW20 117 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 TRHRP34981 398 aaPredicted RBP11.27□□□□□ -0.61
COLCA1-201ENST00000355430 RGS19P49795 217 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 TNK1Q13470 666 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.61
COLCA1-201ENST00000355430 LANCL3Q6ZV70 420 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 OR51T1Q8NGJ9 327 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 OR10K1Q8NGX5 313 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 GSX2Q9BZM3 304 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 SDHAF2Q9NX18 166 aa11.27□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF264O43296 627 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 SCGNO76038 276 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 HOXB9P17482 250 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 FGF9P31371 208 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 NXPH1P58417 271 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 PCBD1P61457 104 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 TOR2AQ5JU69 321 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 LAIR2Q6ISS4 152 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 WDR5BQ86VZ2 330 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 PM20D2Q8IYS1 436 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 OR5L1Q8NGL2 311 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 OR2A1Q8NGT9 310 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 LYRM4Q9HD34 91 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 WIF1Q9Y5W5 379 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 ZNF850A8MQ14 1090 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 CISD3P0C7P0 127 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 TPT1P13693 172 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 STEAP1BQ6NZ63 245 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 C5orf46Q6UWT4 87 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 HOXB13Q92826 284 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 UPRTQ96BW1 309 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 FOXRED1Q96CU9 486 aaPredicted RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 SLC17A4Q9Y2C5 497 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 LOC102725191A0A1B0GVB3 256 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 A6NJ64 397 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 IDSB3KWA1 339 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 HCRTR1O43613 425 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 SULT1B1O43704 296 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 FGF17O60258 216 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 CEACAM5P06731 702 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 FCGR2AP12318 317 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 THBS2P35442 1172 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 P2RX3P56373 397 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 PCBP4P57723 403 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 CYCSP99999 105 aaKnown RBP11.26□□□□□ -0.61
COLCA1-201ENST00000355430 SLC35D3Q5M8T2 416 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 OR4D11Q8NGI4 311 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 ASB17Q8WXJ9 295 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 APMAPQ9HDC9 416 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 DUSP22Q9NRW4 184 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 TRGV8A0A0C4DH27 118 aa11.26□□□□□ -0.61
COLCA1-201ENST00000355430 A0A0D9SG52 128 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms