RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 Q6ZVH6 145 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 SPACA3Q8IXA5 215 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 KRT78Q8N1N4 520 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ZNF433Q8N7K0 673 aaPredicted RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 PROKR2Q8NFJ6 384 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 GIMAP1Q8WWP7 306 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 CST11Q9H112 138 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 NPDC1Q9NQX5 325 aaPredicted RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 LRRC72A6NJI9 287 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 PIAS2O75928 621 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 IGHV3-9P01782 118 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 SDHAP31040 664 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 CCKBRP32239 447 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 NUDT1P36639 197 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 NPBWR1P48145 328 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 KRT6CP48668 564 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 CDH11P55287 796 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 WNT4P56705 351 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 KLF9Q13886 244 aaPredicted RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 TDRG1Q3Y452 100 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 LINGO2Q7L985 606 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 CD163Q86VB7 1156 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 OR7G1Q8NGA0 311 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 OR1S1Q8NH92 325 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ASZ1Q8WWH4 475 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ALG8Q9BVK2 526 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 POPDC3Q9HBV1 291 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 A0A1W2PQM1 296 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 YKT6O15498 198 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 IGHG1P01857 330 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 TCRBP04435 133 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 CDK2P24941 298 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 PRIM2P49643 509 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ZNF81P51508 661 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 DYNC1I2Q13409 638 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 AKAP14Q86UN6 197 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 HORMAD1Q86X24 394 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 GRAMD2AQ8IUY3 354 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 OR6K6Q8NGW6 343 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 MR1Q95460 341 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 UBE2E3Q969T4 207 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 NT5DC2Q9H857 520 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 LIN7BQ9HAP6 207 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 RBFOX1Q9NWB1 397 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 CYP8B1Q9UNU6 501 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 A0A1W2PNR3 127 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 OR14I1A6ND48 311 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 SSX5O60225 188 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 H1F0P07305 194 aaKnown RBP4.96□□□□□ -1.61
CD47-201ENST00000355354 CCL2P13500 99 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 SERPINA4P29622 427 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 RRAS2P62070 204 aaPredicted RBP4.96□□□□□ -1.61
CD47-201ENST00000355354 FOXM1Q08050 763 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 SLC48A1Q6P1K1 146 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 CEACAM19Q7Z692 300 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 PUSL1Q8N0Z8 303 aaKnown RBP4.96□□□□□ -1.61
CD47-201ENST00000355354 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 UCN2Q96RP3 112 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 CDC6Q99741 560 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 THAP7Q9BT49 309 aaPredicted RBP4.96□□□□□ -1.61
CD47-201ENST00000355354 ZNRD1Q9P1U0 126 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 DEC1Q9P2X7 70 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 HS3ST3A1Q9Y663 406 aa4.96□□□□□ -1.61
CD47-201ENST00000355354 BLOC1S5-TXNDC5H3BN57 136 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 ARPC5O15511 151 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 CEACAM4O75871 244 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 SLITRK5O94991 958 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 PRB1P04280 392 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 C5AR1P21730 350 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 SSR2P43308 183 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 GPR1P46091 355 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 CST6Q15828 149 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 C20orf204Q6ZNR8 217 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 SLC36A1Q7Z2H8 476 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 DUSP18Q8NEJ0 188 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 OR51S1Q8NGJ8 323 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 TAAR8Q969N4 342 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 CMSS1Q9BQ75 279 aaKnown RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 LAT2Q9GZY6 243 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 IMPAD1Q9NX62 359 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 DKK3Q9UBP4 350 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 ZNF282Q9UDV7 671 aaPredicted RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 ENOPH1Q9UHY7 261 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 I3L521 148 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 CER1O95813 267 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 ACKR3P25106 362 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 DCAF7P61962 342 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 PDSS1Q5T2R2 415 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 FNDC7Q5VTL7 733 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 C1orf189Q5VU69 101 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 UNQ6126/PRO20091Q6UXV3 157 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 LHFPL4Q7Z7J7 247 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 PEX5LQ8IYB4 626 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 NUP43Q8NFH3 380 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 RAD51AP1Q96B01 352 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 ASIC5Q9NY37 505 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 DNAJB11Q9UBS4 358 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 AGPAT2O15120 278 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms