RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 AIPO00170 330 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 TFECO14948 347 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-201ENST00000350028 EFNA2O43921 213 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 ZNF254O75437 659 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 CCNKO75909 580 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 UBL3O95164 117 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 SPARCP09486 303 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 PSKH1P11801 424 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 RPS27P42677 84 aaKnown RBP14.99□□□□□ -0.01
SAMM50-201ENST00000350028 ADAM8P78325 824 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 HSF1Q00613 529 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 MEP1BQ16820 701 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 TMEM81Q6P7N7 255 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 OPN5Q6U736 354 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 KDM8Q8N371 416 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 OR2Y1Q8NGV0 311 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 GPR148Q8TDV2 347 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 RNF128Q8TEB7 428 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 C4orf45Q96LM5 186 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 C5orf34Q96MH7 638 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 AMELYQ99218 206 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 GFI1Q99684 422 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 AKAP7Q9P0M2 348 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-201ENST00000350028 COA3Q9Y2R0 106 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-201ENST00000350028 ZNF318Q5VUA4 2279 aa14.99□□□□□ -0.01
SAMM50-201ENST00000350028 TRBV5-7A0A0A0MS05 114 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 FAM240BA0A1B0GVZ2 78 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 HMX3A6NHT5 357 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 KLF7O75840 302 aaPredicted RBP14.98□□□□□ -0.01
SAMM50-201ENST00000350028 IGHEP01854 428 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 CD63P08962 238 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 FAM157BP0CG42 384 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 COX6A1P12074 109 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 IFNGR1P15260 489 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 FKBP2P26885 142 aaKnown RBP14.98□□□□□ -0.01
SAMM50-201ENST00000350028 PTGS2P35354 604 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 CBX3Q13185 183 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 ETFDHQ16134 617 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 UBE2NLQ5JXB2 153 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 LRRC69Q6ZNQ3 347 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 UBE2J2Q8N2K1 259 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 FADS6Q8N9I5 356 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 ADPRHL1Q8NDY3 354 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 OR4K17Q8NGC6 315 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 RELTQ969Z4 430 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 ABHD1Q96SE0 405 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 KCNK17Q96T54 332 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 SMAD5Q99717 465 aaKnown RBP14.98□□□□□ -0.01
SAMM50-201ENST00000350028 CMKLR1Q99788 373 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 COL25A1Q9BXS0 654 aaPredicted RBP14.98□□□□□ -0.01
SAMM50-201ENST00000350028 SLC25A18Q9H1K4 315 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 PTGES2Q9H7Z7 377 aa14.98□□□□□ -0.01
SAMM50-201ENST00000350028 ING1Q9UK53 422 aaPredicted RBP14.98□□□□□ -0.01
SAMM50-201ENST00000350028 PCDHGA9Q9Y5G4 932 aaKnown RBP14.98□□□□□ -0.01
SAMM50-201ENST00000350028 A0A1B0GTH9 108 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 A0A1W2PNV4 684 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 SHISA8B8ZZ34 492 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 GPR171O14626 319 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 SLC43A1O75387 559 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 KHDRBS3O75525 346 aaKnown RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 ADH6P28332 368 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 EIF1P41567 113 aaKnown RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 MAGEB1P43366 347 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 EIF2B1Q14232 305 aaKnown RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 RSBN1Q5VWQ0 802 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 C3orf33Q6P1S2 294 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 LRRN1Q6UXK5 716 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 STAC2Q6ZMT1 411 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 DBX2Q6ZNG2 339 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 KRT77Q7Z794 578 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 PRSS35Q8N3Z0 413 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 ZNF433Q8N7K0 673 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 TRIM63Q969Q1 353 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 ORAI1Q96D31 301 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 FOXN4Q96NZ1 517 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 RYDENQ9NUL5 291 aaKnown RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 RPH3AQ9Y2J0 694 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 HS3ST3B1Q9Y662 390 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 CHCHD2Q9Y6H1 151 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 A0A0B4J203 849 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 A0A1B0GVC2 190 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 A6NIN4 97 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 H3BML4 177 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 CTDSPLO15194 276 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 CALCBP10092 127 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 ZNF823P16415 610 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 FOLR3P41439 243 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 KIR3DL2P43630 455 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 SOX2P48431 317 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 MMP15P51511 669 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 RIDAP52758 137 aaKnown RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 POU3F1Q03052 451 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 MYBPHQ13203 477 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 ZNF528Q3MIS6 628 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 TEX30Q5JUR7 227 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 HES5Q5TA89 166 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 DND1Q8IYX4 353 aaKnown RBP14.97□□□□□ -0.01
SAMM50-201ENST00000350028 DTX3Q8N9I9 347 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 ZBTB44Q8NCP5 570 aa14.97□□□□□ -0.01
SAMM50-201ENST00000350028 LGALS14Q8TCE9 139 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms