RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SDF2Q99470 211 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 SLC17A9Q9BYT1 436 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 UQCC1Q9NVA1 299 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 ADAM18Q9Y3Q7 739 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 IER3IP1Q9Y5U9 82 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 TRAV8-7A0A075B6U6 113 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 A0A1B0GTI1 187 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 POM121BA6NF01 834 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 C5orf52A6NGY3 159 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 FAM171A2A8MVW0 826 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 FGF16O43320 207 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 HEXAP06865 529 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 NR0B2Q15466 257 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 INPP5JQ15735 1006 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-202ENST00000348987 PRRT3Q5FWE3 981 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 LIN54Q6MZP7 749 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 USP53Q70EK8 1073 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 SKA3Q8IX90 412 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 CLEC1AQ8NC01 280 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 ARL11Q969Q4 196 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 RNF166Q96A37 237 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-202ENST00000348987 RAB11FIP5Q9BXF6 653 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 SEC11CQ9BY50 192 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 OR51M1Q9H341 326 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 KCNE5Q9UJ90 142 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 PLEKHA6Q9Y2H5 1048 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 NOP16Q9Y3C1 178 aaKnown RBP16.93■□□□□ 0.3
SCARF1-202ENST00000348987 H0Y8X5 98 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 M0QYG6 137 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 SULT2B1O00204 365 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 P2RX6O15547 441 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 CMPK1P30085 196 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 DHRS2Q13268 280 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 FHL1Q13642 323 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 RBM39Q14498 530 aaKnown RBP16.93■□□□□ 0.3
SCARF1-202ENST00000348987 PEA15Q15121 130 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 Q499Y3 187 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 ANKRD16Q6P6B7 361 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 MTSS1LQ765P7 747 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 NAA40Q86UY6 237 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 MISPQ8IVT2 679 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 SLC35F3Q8IY50 421 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 PHOSPHO2Q8TCD6 241 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 LCN9Q8WX39 176 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 NMNAT3Q96T66 252 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 TRPV4Q9HBA0 871 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 FAM96BQ9Y3D0 163 aa16.93■□□□□ 0.3
SCARF1-202ENST00000348987 EPOPA6NHQ4 379 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 S100A6P06703 90 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 C5AR1P21730 350 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 CD34P28906 385 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 PRSS3P35030 304 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 PSMD4P55036 377 aaKnown RBP16.92■□□□□ 0.3
SCARF1-202ENST00000348987 GGTLC2Q14390 218 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 ARHGAP11BQ3KRB8 267 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 GABRG1Q8N1C3 465 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 LRRC25Q8N386 305 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-202ENST00000348987 ZPLD1Q8TCW7 415 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 LAMA1P25391 3075 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 A0A1B0GTH9 108 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 GXYLT2A0PJZ3 443 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 CTSVO60911 334 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 TMEM127O75204 238 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 NGFRP08138 427 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 RUNX2Q13950 521 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 EIF2S3LQ2VIR3 472 aaKnown RBP16.92■□□□□ 0.3
SCARF1-202ENST00000348987 FBXO42Q6P3S6 717 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 OR5AP2Q8NGF4 316 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 FGF14Q92915 247 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 APOOQ9BUR5 198 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 UPB1Q9UBR1 384 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 GHRLQ9UBU3 117 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 CHRNA9Q9UGM1 479 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 DPP7Q9UHL4 492 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 SERTAD3Q9UJW9 196 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 DTX4Q9Y2E6 619 aa16.92■□□□□ 0.3
SCARF1-202ENST00000348987 BRWD1Q9NSI6 2320 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 CPED1A4D0V7 1026 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 EFCAB7A8K855 629 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 PTAFRP25105 342 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 DIO1P49895 249 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 PPT1P50897 306 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 GAS6Q14393 721 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 ODF4Q2M2E3 257 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 VWA2Q5GFL6 755 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 PRSS41Q7RTY9 318 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 RPS4Y2Q8TD47 263 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 NKX3-1Q99801 234 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-202ENST00000348987 ACKR4Q9NPB9 350 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 ADAP2Q9NPF8 381 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 SPTBP11277 2137 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 DOCK8Q8NF50 2099 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 TTLL8A6PVC2 850 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 UBE2CO00762 179 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 LDB3O75112 727 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 OR8G3PP0DMU2 310 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 CD79AP11912 226 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 RPS21P63220 83 aaKnown RBP16.91■□□□□ 0.3
SCARF1-202ENST00000348987 GFOD2Q3B7J2 385 aa16.91■□□□□ 0.3
SCARF1-202ENST00000348987 AKIRIN2Q53H80 203 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms