RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ADAM8P78325 824 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 PIGFQ07326 219 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 BSPH1Q075Z2 132 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 GABRA6Q16445 453 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 ACKR1Q16570 336 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 ELOA3BQ3SY89 546 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 PHYHD1Q5SRE7 291 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 NCMAPQ5T1S8 102 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 MBOAT2Q6ZWT7 520 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 ALDH16A1Q8IZ83 802 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 ELOA3Q8NG57 546 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 OR13F1Q8NGS4 319 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 TRUB1Q8WWH5 349 aaKnown RBP14.1□□□□□ -0.15
RAB5C-201ENST00000346213 ZNF837Q96EG3 531 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-201ENST00000346213 TSC22D3Q99576 134 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 GPA33Q99795 319 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 PRSS27Q9BQR3 290 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 NELFAQ9H3P2 528 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 C12orf10Q9HB07 376 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 RSL24D1Q9UHA3 163 aaKnown RBP14.1□□□□□ -0.15
RAB5C-201ENST00000346213 SLC7A7Q9UM01 511 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 SLC25A15Q9Y619 301 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 COMMD3-BMI1R4GMX3 469 aa14.1□□□□□ -0.15
RAB5C-201ENST00000346213 FLNAP21333 2647 aaKnown RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 OR5H1A6NKK0 313 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 RGS10O43665 173 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 TRAF3IP2O43734 574 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 MRPL33O75394 65 aaKnown RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 SEC14L2O76054 403 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 SOX14O95416 240 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 AHSA1O95433 338 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 IGFBP1P08833 259 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 GSTT1P30711 240 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 SNRPGP62308 76 aaKnown RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 ZNF613Q6PF04 617 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 RASSF6Q6ZTQ3 369 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 PTCHD4Q6ZW05 846 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 PRSS48Q7RTY5 328 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 RNF113BQ8IZP6 322 aaKnown RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 UBE2J2Q8N2K1 259 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 OR52N5Q8NH56 324 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 ALKBH3Q96Q83 286 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 NAA11Q9BSU3 229 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-201ENST00000346213 TRIM2Q9C040 744 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 DLL4Q9NR61 685 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 FKBP14Q9NWM8 211 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 PSORS1C1Q9UIG5 152 aa14.09□□□□□ -0.15
RAB5C-201ENST00000346213 ACANP16112 2415 aa14.08□□□□□ -0.15
RAB5C-201ENST00000346213 MTORP42345 2549 aa14.08□□□□□ -0.15
RAB5C-201ENST00000346213 MS4A18H0YCH9 400 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 GPR171O14626 319 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 ZNF432O94892 652 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 FPR3P25089 353 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 HOXC12P31275 282 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 GIPRP48546 466 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 SH3BGRP55822 239 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 CDK5Q00535 292 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 EMX1Q04741 257 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 DYNC1I2Q13409 638 aaKnown RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 MS4A18Q3C1V0 323 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 ADAM5Q6NVV9 412 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 CLVS1Q8IUQ0 354 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 SVOPQ8N4V2 548 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 ZNF420Q8TAQ5 688 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 MUL1Q969V5 352 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 NMD3Q96D46 503 aaKnown RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 TMUB1Q9BVT8 246 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 SF3B5Q9BWJ5 86 aaKnown RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 C1QTNF6Q9BXI9 259 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 CCDC90BQ9GZT6 254 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 TMEM27Q9HBJ8 222 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 SLC25A19Q9HC21 320 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 KRCC1Q9NPI7 259 aaPredicted RBP14.08□□□□□ -0.16
RAB5C-201ENST00000346213 CLN6Q9NWW5 311 aa14.08□□□□□ -0.16
RAB5C-201ENST00000346213 ZNF503-AS2A6NEH8 195 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 SHISA9B4DS77 424 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 DCKP27707 260 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 MVKQ03426 396 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 PPA1Q15181 289 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 HIKESHIQ53FT3 197 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 FAM69AQ5T7M9 428 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 ULK3Q6PHR2 472 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 B3GLCTQ6Y288 498 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 AAED1Q7RTV5 226 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 NRMQ8IXM6 262 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 TMEM255BQ8WV15 326 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 AKAP1Q92667 903 aaKnown RBP eCLIP14.07□□□□□ -0.16
RAB5C-201ENST00000346213 FAM46AQ96IP4 442 aaKnown RBP14.07□□□□□ -0.16
RAB5C-201ENST00000346213 ZNF426Q9BUY5 554 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 TAPBPLQ9BX59 468 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 HDHD5Q9BXW7 423 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 ASB6Q9NWX5 421 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 TAS2R16Q9NYV7 291 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 PTTG2Q9NZH5 202 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 RPS6KB2Q9UBS0 482 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 ZFHX3Q15911 3703 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 TRAV36DV7A0A075B6V5 113 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 CNOT4O95628 575 aaKnown RBP14.07□□□□□ -0.16
RAB5C-201ENST00000346213 MT-ND2P03891 347 aa14.07□□□□□ -0.16
RAB5C-201ENST00000346213 SOD3P08294 240 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms