RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 KXD1Q9BQD3 176 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 RSPH9Q9H1X1 276 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 PCDHB10Q9UN67 800 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ERVK-19Q9WJR5 959 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 FARSAQ9Y285 508 aaKnown RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 TBC1D3DA0A087WVF3 549 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TBC1D3IA0A087WXS9 549 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TBC1D3LB9A6J9 549 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 PRKNO60260 465 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 TBC1D3HP0C7X1 549 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 CTXN1P60606 82 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 B2MP61769 119 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 RUNX3Q13761 415 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 SCGB2B2Q4G0G5 96 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 GLT8D1Q68CQ7 371 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TBC1D3CQ6IPX1 549 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ZNF627Q7L945 461 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 CBLN2Q8IUK8 224 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TBC1D3Q8IZP1 549 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 KCNRGQ8N5I3 272 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 GATSQ8NAP1 163 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 GPR148Q8TDV2 347 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TSEN15Q8WW01 171 aaKnown RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 PPP1R14AQ96A00 147 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TSACCQ96A04 125 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 CTHRC1Q96CG8 243 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 MOGAT1Q96PD6 335 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 C12orf57Q99622 126 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 SLC17A9Q9BYT1 436 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 COMMD4Q9H0A8 199 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ACTR10Q9NZ32 417 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 LRIT1Q9P2V4 623 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 LOC100509620A0A075B734 347 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 TRBV5-7A0A0A0MS05 114 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 URADA6NGE7 173 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 H0YGG7 62 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 OR10H2O60403 315 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 KCNJ13O60928 360 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 AKR7A3O95154 331 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 AMY2AP04746 511 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 AGTR1P30556 359 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ADPRHP54922 357 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ARF3P61204 181 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 PPIAP62937 165 aaKnown RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 SERTAD2Q14140 314 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 C9orf50Q5SZB4 431 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 FIGLAQ6QHK4 219 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 SFTPA2Q8IWL1 248 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 OR4C3Q8NH37 302 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 FOXN4Q96NZ1 517 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 AMELYQ99218 206 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 C1orf198Q9H425 327 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 GPN3Q9UHW5 284 aaPredicted RBP16.12■□□□□ 0.17
VHL-202ENST00000345392 GTF2A1LQ9UNN4 478 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 LHX6Q9UPM6 363 aa16.12■□□□□ 0.17
VHL-202ENST00000345392 ARHGEF17Q96PE2 2063 aaPredicted RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 ELOA3DA6NLF2 546 aaPredicted RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 CSTAP01040 98 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 FCARP24071 287 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 BDKRB2P30411 391 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 PSMD4P55036 377 aaKnown RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 DHRS2Q13268 280 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ELOA3BQ3SY89 546 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 UNQ6126/PRO20091Q6UXV3 157 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ZNF550Q7Z398 422 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 LDLRAD3Q86YD5 345 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ZNF595Q8IYB9 648 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ELOA3Q8NG57 546 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 CCDC107Q8WV48 283 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 SPACA7Q96KW9 195 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 USB1Q9BQ65 265 aaKnown RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 APOOQ9BUR5 198 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 SFXN1Q9H9B4 322 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ATPIF1Q9UII2 106 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 TNFSF18Q9UNG2 199 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 NOP16Q9Y3C1 178 aaKnown RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 MAOBP27338 520 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 C11orf87Q6NUJ2 197 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 CDC20BQ86Y33 519 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 RCBTB1Q8NDN9 531 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 GPX8Q8TED1 209 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ANKRD9Q96BM1 317 aaPredicted RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 C3orf49Q96BT1 292 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ALX4Q9H161 411 aaPredicted RBP16.11■□□□□ 0.17
VHL-202ENST00000345392 POLE3Q9NRF9 147 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 ASF1BQ9NVP2 202 aa16.11■□□□□ 0.17
VHL-202ENST00000345392 RNF222A6NCQ9 220 aa16.1■□□□□ 0.17
VHL-202ENST00000345392 FAM25EA8MYX2 175 aa16.1■□□□□ 0.17
VHL-202ENST00000345392 F12P00748 615 aaPredicted RBP16.1■□□□□ 0.17
VHL-202ENST00000345392 ZNF10P21506 573 aaPredicted RBP16.1■□□□□ 0.17
VHL-202ENST00000345392 DLSTP36957 453 aa16.1■□□□□ 0.17
VHL-202ENST00000345392 ATP1B3P54709 279 aa16.1■□□□□ 0.17
VHL-202ENST00000345392 PRPS1P60891 318 aa16.1■□□□□ 0.17
VHL-202ENST00000345392 RPS4XP62701 263 aaKnown RBP16.1■□□□□ 0.17
VHL-202ENST00000345392 SNTB1Q13884 538 aaKnown RBP16.1■□□□□ 0.17
VHL-202ENST00000345392 PRRT3Q5FWE3 981 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms