RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RAB36O95755 333 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 OR8G3PP0DMU2 310 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 BMP4P12644 408 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF26P17031 533 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 NR4A1P22736 598 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 IFNA8P32881 189 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 FMODQ06828 376 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 DAG1Q14118 895 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 FXNQ16595 210 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 C10orf128Q5T292 105 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 CLDN22Q8N7P3 220 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 IL17RDQ8NFM7 739 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 OR4K5Q8NGD3 323 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 OR13C2Q8NGS9 318 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 OR51A7Q8NH64 312 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 SLC7A13Q8TCU3 470 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 TNFRSF13CQ96RJ3 184 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 DOK1Q99704 481 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 DENND2DQ9H6A0 471 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 NMNAT1Q9HAN9 279 aaPredicted RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF346Q9UL40 294 aaKnown RBP12.45□□□□□ -0.42
HMGN3-202ENST00000344726 ARL2BPQ9Y2Y0 163 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 UGT2A1Q9Y4X1 527 aa12.45□□□□□ -0.42
HMGN3-202ENST00000344726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■□□□□ 10.7
HMGN3-202ENST00000344726 HTR3EA5X5Y0 456 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 EFCAB9A8MZ26 197 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 hCG_2039718K7EN88 272 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 DIRAS1O95057 198 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 IGHMP01871 453 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 SAGP10523 405 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 NPR2P20594 1047 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 CDAP32320 146 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 MSX2P35548 267 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 GPR4P46093 362 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 CTXN1P60606 82 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 RPL27P61353 136 aaKnown RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 VLDLRP98155 873 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 TMEM249Q2WGJ8 235 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 IQCCQ4KMZ1 466 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF730Q6ZMV8 503 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 MBOAT2Q6ZWT7 520 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 CDK20Q8IZL9 346 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 RNF113BQ8IZP6 322 aaKnown RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 ZCCHC24Q8N2G6 241 aaKnown RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 PAQR4Q8N4S7 273 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF519Q8TB69 540 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 FAM168AQ92567 244 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 NABP1Q96AH0 204 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 TSPAN32Q96QS1 320 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 MDFIQ99750 246 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
HMGN3-202ENST00000344726 CD300AQ9UGN4 299 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 RPS6KA6Q9UK32 745 aa12.44□□□□□ -0.42
HMGN3-202ENST00000344726 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 SEMG1P04279 462 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 SERPINA5P05154 406 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 MMP7P09237 267 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-202ENST00000344726 HSD17B1P14061 328 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 PPOXP50336 477 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 ZNF84P51523 738 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 DSCR9P59020 149 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
HMGN3-202ENST00000344726 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 SLC25A47Q6Q0C1 308 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 TMPRSS11FQ6ZWK6 438 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 HDDC2Q7Z4H3 204 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 OAFQ86UD1 273 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 PGAM4Q8N0Y7 254 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 NSMAFQ92636 917 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 LRRC37BQ96QE4 947 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 MRPL37Q9BZE1 423 aaKnown RBP12.43□□□□□ -0.42
HMGN3-202ENST00000344726 ANKRD19PQ9H560 264 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 GORASP2Q9H8Y8 452 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 V9GYQ6 96 aa12.43□□□□□ -0.42
HMGN3-202ENST00000344726 FBN1P35555 2871 aaKnown RBP12.43□□□□□ -0.42
HMGN3-202ENST00000344726 TRBV4-1A0A0J9YWV2 114 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 A0A1W2PRQ8 180 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SH3PXD2BA1X283 911 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 TP53P04637 393 aaPredicted RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 H1F0P07305 194 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 CCL2P13500 99 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SLC25A16P16260 332 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 RHCEP18577 417 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SLC9A3P48764 834 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 MRPS34P82930 218 aaKnown RBP12.42□□□□□ -0.42
HMGN3-202ENST00000344726 CD47Q08722 323 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 DGCR6Q14129 220 aa12.42□□□□□ -0.42
HMGN3-202ENST00000344726 SEC23BQ15437 767 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms