RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FAM3CQ92520 227 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 SIDT1Q9NXL6 827 aaKnown RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 PYCARD-AS1I3L0S3 204 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 HNRNPA2B1P22626 353 aaKnown RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 NDUFS1P28331 727 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 THBS3P49746 956 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 ENDOGQ14249 297 aaKnown RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 ZNF628Q5EBL2 1059 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 OR52B4Q8NGK2 314 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 ARV1Q9H2C2 271 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 COL5A1-AS1Q5SY13 56 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 GPR142Q7Z601 462 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 GABRG1Q8N1C3 465 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 JSRP1Q96MG2 331 aaPredicted RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 FGF19O95750 216 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 TRHRP34981 398 aaPredicted RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 SLC6A11P48066 632 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 FAM103A1Q9BTL3 118 aaKnown RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 TMEM218A2RU14 115 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 EIF3GO75821 320 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIO-202ENST00000344204 INHBBP09529 407 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 AADACP22760 399 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 DCTDP32321 178 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 CTSL3PQ5NE16 218 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 NSUN5P2Q63ZY6 315 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 LYG2Q86SG7 212 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 PRODH2Q9UF12 536 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 CCDC187A0A096LP49 1063 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 MBTPS2O43462 519 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 ZFP62Q8NB50 900 aaPredicted RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 AUNIPQ9H7T9 357 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 SLC14A2Q15849 920 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 ACER3Q9NUN7 267 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 CIDEAO60543 219 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 SLC7A9P82251 487 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 OR4C11Q6IEV9 310 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 Q6ZTK2 550 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 PRRG4Q9BZD6 226 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 USF1P22415 310 aaPredicted RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 GABRR1P24046 479 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 TMEM115Q12893 351 aaPredicted RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 MIDNQ504T8 468 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
TRIO-202ENST00000344204 ALG12Q9BV10 488 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 MOB1AQ9H8S9 216 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 K7ERU9 68 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 FBP1P09467 338 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 PTGFRP43088 359 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 C11orf87Q6NUJ2 197 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 C22orf39Q6P5X5 142 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
TRIO-202ENST00000344204 JMJD7P0C870 316 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 TPBGQ13641 420 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 GPX8Q8TED1 209 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 ZDHHC4Q9NPG8 344 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 RHBDD3Q9Y3P4 386 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 OR1A2Q9Y585 309 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 PCDHGA9Q9Y5G4 932 aaKnown RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 OR8G3PP0DMU2 310 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 AKR1A1P14550 325 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 POLR2HP52434 150 aaKnown RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 NKAIN3Q8N8D7 197 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 TBPP20226 339 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 RPS18P62269 152 aaKnown RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 OR2L13Q8N349 312 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 CACNA1EQ15878 2313 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 FEZF1A0PJY2 475 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 SLURP2P0DP57 97 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 HOXC12P31275 282 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 FAAP20Q6NZ36 180 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 Q6ZN92 141 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 ZNF429Q86V71 674 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 RNF113BQ8IZP6 322 aaKnown RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 TMEM234Q8WY98 164 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 ELOVL3Q9HB03 270 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 ADH1BP00325 375 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 PPP1CBP62140 327 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 VWA2Q5GFL6 755 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 EDAQ92838 391 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 FAM74A7A6NL05 159 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 FAM74A3Q4VXF1 159 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 TMEM217Q8N7C4 229 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 SNX22Q96L94 193 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 MGAMO43451 1857 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 SLC35A1P78382 337 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
TRIO-202ENST00000344204 ZNF66Q6ZN08 573 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms