RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 OR8D1Q8WZ84 308 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 THRSPQ92748 146 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF689Q96CS4 500 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 ZMYND19Q96E35 227 aaPredicted RBP16.86■□□□□ 0.29
SMPD1-201ENST00000342245 PRRT1Q99946 306 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 TTTY10Q9BZA0 68 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 TGIF2Q9GZN2 237 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 SLC2A8Q9NY64 477 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 CD84Q9UIB8 345 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 SERTAD3Q9UJW9 196 aa16.86■□□□□ 0.29
SMPD1-201ENST00000342245 OR10H2O60403 315 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 FKTNO75072 461 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 PLGP00747 810 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-201ENST00000342245 DCNP07585 359 aaKnown RBP16.85■□□□□ 0.29
SMPD1-201ENST00000342245 TACSTD2P09758 323 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 ADRA2CP18825 462 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 PCP4P48539 62 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 NR0B2Q15466 257 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 HIST2H3PS2Q5TEC6 136 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 ISOC2Q96AB3 205 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 BPIFA2Q96DR5 249 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 AIF1LQ9BQI0 150 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 MTHFD2LQ9H903 347 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-201ENST00000342245 PELI2Q9HAT8 420 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 ZFPL1O95159 310 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 MAP3K8P41279 467 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 SULT1A1P50225 295 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 NHLH2Q02577 135 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 AGERQ15109 404 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 C21orf62-AS1Q17RA5 79 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 FNDC3BQ53EP0 1204 aaKnown RBP16.85■□□□□ 0.29
SMPD1-201ENST00000342245 SLC35D3Q5M8T2 416 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 NRROSQ86YC3 692 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 RGP1Q92546 391 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-201ENST00000342245 TCTN2Q96GX1 697 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 LMAN2LQ9H0V9 348 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 MED31Q9Y3C7 131 aa16.85■□□□□ 0.29
SMPD1-201ENST00000342245 TRBV5-5A0A0J9YX44 114 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 RPL36A-HNRNPH2H7BZ11 118 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 TMPRSS11DO60235 418 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 AGR2O95994 175 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 CYB5AP00167 134 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 RPLP2P05387 115 aaKnown RBP16.84■□□□□ 0.29
SMPD1-201ENST00000342245 GYPBP06028 91 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 LYL1P12980 280 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 MPZP25189 248 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 TACR3P29371 465 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 YOD1Q5VVQ6 348 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-201ENST00000342245 FRRS1Q6ZNA5 592 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 TMEM150AQ86TG1 271 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 CD163Q86VB7 1156 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 BPIFB2Q8N4F0 458 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF511Q8NB15 262 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 OR13C2Q8NGS9 318 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ZG16BQ96DA0 208 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 B4GALT6Q9UBX8 382 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 KCNE3Q9Y6H6 103 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 FRMPD3Q5JV73 1810 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 FAM221BA6H8Z2 402 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF840PA6NDX5 716 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 DUXAA6NLW8 204 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 TBX6O95947 436 aaPredicted RBP16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF735P0CB33 412 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 LPAR6P43657 344 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 POLR2LP62875 67 aaKnown RBP16.84■□□□□ 0.29
SMPD1-201ENST00000342245 IL13RA1P78552 427 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 GAMTQ14353 236 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ELOCQ15369 112 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 PAPD4Q6PIY7 484 aaKnown RBP16.84■□□□□ 0.29
SMPD1-201ENST00000342245 HEPN1Q6WQI6 88 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ACBD4Q8NC06 268 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 OR5R1Q8NH85 324 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 PFN4Q8NHR9 129 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 PRAP1Q96NZ9 151 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 AQP10Q96PS8 301 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 GPR174Q9BXC1 333 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 NRSN2Q9GZP1 204 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 KCNG2Q9UJ96 466 aa16.84■□□□□ 0.29
SMPD1-201ENST00000342245 ZNF736B4DX44 427 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 LRG1P02750 347 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 HCKP08631 526 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 IRF1P10914 325 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 ADH6P28332 368 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 DIO1P49895 249 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 LSM6P62312 80 aaKnown RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 SURF2Q15527 256 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 TGIF1Q15583 401 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 GDF6Q6KF10 455 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 CLEC9AQ6UXN8 241 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 ETFBKMTQ8IXQ9 262 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 ACOT4Q8N9L9 421 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 C19orf47Q8N9M1 422 aaKnown RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 OR10D4PQ8NGN7 298 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 LYPD6BQ8NI32 183 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 C16orf58Q96GQ5 468 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 NOL4LQ96MY1 436 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 GAS2L1Q99501 681 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF350Q9GZX5 532 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 UBQLN4Q9NRR5 601 aa16.83■□□□□ 0.28
SMPD1-201ENST00000342245 CXorf51AA0A1B0GTR3 108 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms