RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 KLK2P20151 261 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 B3GNT9Q6UX72 402 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 EGFL6Q8IUX8 553 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 COQ8AQ8NI60 647 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 ELP4Q96EB1 424 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 MS4A8Q9BY19 250 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PARD6BQ9BYG5 372 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PTTG3PQ9NZH4 202 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 ASB1Q9Y576 335 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 MEIKINA0A087WXM9 373 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 NME2P1O60361 137 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 IFNA17P01571 189 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 NME2P22392 152 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 MTCP1P56278 107 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PRKCDQ05655 676 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 FZD5Q13467 585 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 CLINT1Q14677 625 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 FBXW9Q5XUX1 488 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 ZNF770Q6IQ21 691 aaPredicted RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 NPSR1Q6W5P4 371 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 TMEM151AQ8N4L1 468 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 OR10AD1Q8NGE0 317 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 SLC41A3Q96GZ6 507 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 CNBD2Q96M20 576 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 SH3BGRL3Q9H299 93 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 LOC105371242A0A075B767 164 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 A0A1B0GUS0 222 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 KCNK2O95069 426 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 GRB2P62993 217 aaKnown RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 MPEG1Q2M385 716 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 GTDC1Q4AE62 458 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 TRMT12Q53H54 448 aaKnown RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 TMEM69Q5SWH9 247 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 RBMXL3Q8N7X1 1067 aaKnown RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 UPRTQ96BW1 309 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PEBP4Q96S96 227 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 METTL9Q9H1A3 318 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 STOML2Q9UJZ1 356 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PTGES3LE9PB15 166 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 DAOP14920 347 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 TAS2R43P59537 309 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 RAC3P60763 192 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 ANKDD1AQ495B1 522 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 HMGN2P46Q86SG4 172 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 TRABD2AQ86V40 505 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 Q8NFD4 153 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 LILRB4Q8NHJ6 448 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 C16orf52Q8NHV5 167 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 ARRDC2Q8TBH0 407 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 MIB2Q96AX9 1013 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 SLC7A6OSQ96CW6 309 aaPredicted RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 INTS14Q96SY0 518 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 LAT2Q9GZY6 243 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PKDREJQ9NTG1 2253 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 GGT5P36269 586 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PITPNBP48739 271 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 CCL8P80075 99 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 ZSWIM9Q86XI8 627 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 APLFQ8IW19 511 aaPredicted RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 C8orf59Q8N0T1 100 aaPredicted RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 GTF3AQ92664 365 aaKnown RBP7.58□□□□□ -1.2
HMGB1-203ENST00000341423 C1QTNF3Q9BXJ4 246 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 SLC23A1Q9UHI7 598 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 WDR37Q9Y2I8 494 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 PTGDR2Q9Y5Y4 395 aa7.58□□□□□ -1.2
HMGB1-203ENST00000341423 LOC285095A0A1B0GVY8 99 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ICOSLGO75144 302 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 C21orf58P58505 322 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 B4GALNT1Q00973 533 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 SLC48A1Q6P1K1 146 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 TMEM217Q8N7C4 229 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 NEURL3Q96EH8 262 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ATP5SQ99766 215 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ZCCHC4Q9H5U6 513 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 MYEF2Q9P2K5 600 aaKnown RBP7.57□□□□□ -1.2
HMGB1-203ENST00000341423 MALT1Q9UDY8 824 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 UBR2Q8IWV8 1755 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 IGHV3OR16-10A0A075B7F0 116 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 CXorf65A6NEN9 183 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 PIGGQ5H8A4 983 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ZDHHC21Q8IVQ6 265 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 PSMA8Q8TAA3 256 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ZNF596Q8TC21 504 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ADAT1Q9BUB4 502 aaKnown RBP7.57□□□□□ -1.2
HMGB1-203ENST00000341423 OR52A5Q9H2C5 316 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 PLEKHJ1Q9NW61 149 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 DLGAP2Q9P1A6 1054 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 ABCD2Q9UBJ2 740 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 TRPM3Q9HCF6 1732 aaPredicted RBP7.57□□□□□ -1.2
HMGB1-203ENST00000341423 PNMA8CA0A1B0GUJ8 204 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 TP73O15350 636 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 LILRA1O75019 489 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 IGLV3-27P01718 113 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 GKN3PP0CG01 181 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 RAB3AP20336 220 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 SOX2P48431 317 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 GPX6P59796 221 aa7.57□□□□□ -1.2
HMGB1-203ENST00000341423 MSMO1Q15800 293 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms