RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ASB11Q8WXH4 323 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 GHSRQ92847 366 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ARL11Q969Q4 196 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PPCDCQ96CD2 204 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NEURL3Q96EH8 262 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RRNAD1Q96FB5 475 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SPRY4Q9C004 299 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 APMAPQ9HDC9 416 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RXFP3Q9NSD7 469 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CNIH4Q9P003 139 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TAAR2Q9P1P5 351 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR5V1Q9UGF6 321 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NCOR1O75376 2440 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CH25HO95992 272 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ANXA5P08758 320 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR8G3PP0DMU2 310 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CDK2P24941 298 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ACRV1P26436 265 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 NDUFS1P28331 727 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 AGTR1P30556 359 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TIA1P31483 386 aaKnown RBP eCLIP5.07□□□□□ -1.66e-10■■■■□ 20.6
CSDE1-202ENST00000339438 GSK3AP49840 483 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RAB5CP51148 216 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 UCP2P55851 309 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ST8SIA6P61647 398 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CHIT1Q13231 466 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 COL9A2Q14055 689 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MEF2DQ14814 521 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 TRAM1Q15629 374 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 GFI1BQ5VTD9 330 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 RAB12Q6IQ22 244 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 PLBD1Q6P4A8 553 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FIGNL1Q6PIW4 674 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ARL9Q6T311 187 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 UNQ6126/PRO20091Q6UXV3 157 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SPNS3Q6ZMD2 512 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 Q6ZS52 159 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 CHST9Q7L1S5 443 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ADCK2Q7Z695 626 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 DPPA2Q7Z7J5 298 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 KLHDC8AQ8IYD2 350 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 HIST3H2BBQ8N257 126 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 HPSE2Q8WWQ2 592 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 OR5B2Q96R09 309 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 ADGRE3Q9BY15 652 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 MRPS30Q9NP92 439 aaKnown RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SPHK2Q9NRA0 654 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 SIRT3Q9NTG7 399 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-202ENST00000339438 LPAR3Q9UBY5 353 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 FBXL4Q9UKA2 621 aa5.07□□□□□ -1.6
CSDE1-202ENST00000339438 A0A087WUJ7 227 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 A0A1W2PPK0 400 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 IFITM5A6NNB3 132 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 H7C417 338 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CDC42EP2O14613 210 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 FARS2O95363 451 aaKnown RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CRABP1P29762 137 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 METAP1P53582 386 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR12D2P58182 307 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 AP3S2P59780 193 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 NHLH2Q02577 135 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SRSF5Q13243 272 aaKnown RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 DDX39BQ13838 428 aaKnown RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CLEC12AQ5QGZ9 265 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ACBD7Q8N6N7 88 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 BEND2Q8NDZ0 799 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR51G2Q8NGK0 314 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR9A2Q8NGT5 310 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ADAMTS17Q8TE56 1095 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SLC25A43Q8WUT9 341 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 SMPDL3BQ92485 455 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 IRF7Q92985 503 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 RFKQ969G6 155 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 NTNG2Q96CW9 530 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 HAVCR1Q96D42 359 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 AMDHD1Q96NU7 426 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ATG101Q9BSB4 218 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF471Q9BX82 626 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 MAGEH1Q9H213 219 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 LMAN1LQ9HAT1 526 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ADGRL4Q9HBW9 690 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 TMEM138Q9NPI0 162 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 LHX3Q9UBR4 397 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 MTFP1Q9UDX5 166 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 AK6Q9Y3D8 172 aaKnown RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 HDGFL3Q9Y3E1 203 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 FLVCR1Q9Y5Y0 555 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 A0A087WV48 116 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 TEX13DA0A0J9YY54 714 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 KANTRA0A1W2PQU2 76 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 C7orf77A4D0Y5 90 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 PMP2P02689 132 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 ZNF14P17017 642 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 GSTM3P21266 225 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 VAMP1P23763 118 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 CERS1P27544 350 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 GDI1P31150 447 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 FRKP42685 505 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-202ENST00000339438 LPAR6P43657 344 aa5.06□□□□□ -1.6
CSDE1-202ENST00000339438 OR2B8PP59922 312 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms