RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 HSD17B8Q92506 261 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 CNRIP1Q96F85 164 aaPredicted RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 SDSLQ96GA7 329 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 GCM1Q9NP62 436 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.61□□□□□ -0.392e-7■■■□□ 17.5
RTN4-202ENST00000337526 OBP2AQ9NY56 170 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
RTN4-202ENST00000337526 A0A0U1RQK1 487 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 LILRB5O75023 590 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 CHRM2P08172 466 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SLC35A1P78382 337 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 MFGE8Q08431 387 aaPredicted RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 PRSS36Q5K4E3 855 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 MSRB3Q8IXL7 192 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 OR2A1Q8NGT9 310 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 ABHD5Q8WTS1 349 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 MED30Q96HR3 178 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 NEURL2Q9BR09 285 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SRRQ9GZT4 340 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SLC2A1P11166 492 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 GABRB1P18505 474 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 CD1CP29017 333 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 GLYR1Q49A26 553 aaPredicted RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 Q6ZNB5 142 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 GRINAQ7Z429 371 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 BTLAQ7Z6A9 289 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SYS1Q8N2H4 156 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 PATE1Q8WXA2 126 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 TCEAL7Q9BRU2 100 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SSX4O60224 188 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 PMP2P02689 132 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 DPP4P27487 766 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 IL2RGP31785 369 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 RPL27P61353 136 aaKnown RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 BDH1Q02338 343 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 PMPCAQ10713 525 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 FAM122CQ6P4D5 195 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 TMEM81Q6P7N7 255 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 SLC6A18Q96N87 628 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 FGF20Q9NP95 211 aaPredicted RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 SIRT5Q9NXA8 310 aa12.61□□□□□ -0.39
RTN4-202ENST00000337526 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
RTN4-202ENST00000337526 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 GIPP09681 153 aaPredicted RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 NPY4RP50391 375 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 TPMTP51580 245 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 OR10A3P58181 314 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 DCDP81605 110 aaKnown RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 KIAA0040Q15053 153 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 GLIPR1L1Q6UWM5 242 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 H1FNTQ75WM6 255 aaPredicted RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 OR13C5Q8NGS8 318 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SECTM1Q8WVN6 248 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 HAS2Q92819 552 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SPNS1Q9H2V7 528 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 WSB2Q9NYS7 404 aaPredicted RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 MED16Q9Y2X0 877 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 OR6C6A6NF89 314 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 MCRIP1C9JLW8 97 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SIGLEC6O43699 453 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 MAP2K6P52564 334 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 STK11Q15831 433 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 ZNF684Q5T5D7 378 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 TMUB2Q71RG4 321 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 RHOUQ7L0Q8 258 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 BHLHA9Q7RTU4 235 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 AGBL5Q8NDL9 886 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 GCDHQ92947 438 aaPredicted RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 AP1S3Q96PC3 154 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SLC19A3Q9BZV2 496 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 E9PI62 339 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 EIF4E2O60573 245 aaKnown RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 NKAIN2Q5VXU1 208 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 PGAP1Q75T13 922 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 FAM213BQ8TBF2 198 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 RBM38Q9H0Z9 239 aaKnown RBP12.6□□□□□ -0.39
RTN4-202ENST00000337526 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 A0A1W2PPV4 95 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 G3V3Y1 287 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 M0R082 166 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SGCEO43556 437 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 LPLP06858 475 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SELENBP1Q13228 472 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 SMIM19Q96E16 107 aa12.6□□□□□ -0.39
RTN4-202ENST00000337526 TMEM200CA6NKL6 621 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 AIPO00170 330 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 PPM1DO15297 605 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 SERPINA7P05543 415 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 CD22P20273 847 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 CNR1P21554 472 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 ARL3P36405 182 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 ELAVL1Q15717 326 aaKnown RBP12.59□□□□□ -0.39
RTN4-202ENST00000337526 RDH10Q8IZV5 341 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 TEX19Q8NA77 164 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 ST7LQ8TDW4 575 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 ZFPM2Q8WW38 1151 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 C3orf49Q96BT1 292 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms