RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZACNQ401N2 412 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 XKR7Q5GH72 579 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 GCNT6Q5T4J0 391 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 R3HDM4Q96D70 268 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ATXN7L3BQ96GX2 97 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACPTQ9BZG2 426 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 TLE6Q9H808 572 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 TRAPPC1Q9Y5R8 145 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SNRPGP15A8MWD9 76 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 PHF1O43189 567 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 RBM11P57052 281 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF543Q08ER8 600 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 LRRC37A5PQ49AS3 106 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF100Q8IYN0 542 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACER1Q8TDN7 264 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 TOMM40LQ969M1 308 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM19Q96HH6 336 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 MRPL4Q9BYD3 311 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ERGP11308 486 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 CAV2P51636 162 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 BACE1P56817 501 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SNRPEP62304 92 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM268Q5VZI3 342 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF111Q6ZNA4 994 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZDHHC21Q8IVQ6 265 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 CERS5Q8N5B7 392 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC26A10Q8NG04 563 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR52E4Q8NGH9 312 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 FEZF2Q8TBJ5 459 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 PIGCQ92535 297 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 EGLN3Q9H6Z9 239 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 IL37Q9NZH6 218 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 CTSFQ9UBX1 484 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADAMTS6Q9UKP5 1117 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 UBE2L6O14933 153 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ITGB7P26010 798 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ATXN7L3Q14CW9 347 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC35G5Q96KT7 338 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 MRPL37Q9BZE1 423 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 DNAJC4Q9NNZ3 241 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLIT2O94813 1529 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 PCNX3Q9H6A9 2034 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 GSG1L2A8MUP6 293 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 KLF7O75840 302 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACTL6BO94805 426 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF823P16415 610 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 HLA-DQA1Q5Y7H0 255 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SHC4Q6S5L8 630 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC16A13Q7RTY0 426 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADGRA1Q86SQ6 560 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 MBOAT7Q96N66 472 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 MCEEQ96PE7 176 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 HCAR1Q9BXC0 346 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC35B3Q9H1N7 401 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 NAT8Q9UHE5 227 aa5.63□□□□□ -1.51
CDC42BPA-201ENST00000334218 A0A1W2PQ67 120 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 PEX10O60683 326 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 NOVA1P51513 510 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 JAK3P52333 1124 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DAOAP59103 153 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 KCNJ11Q14654 390 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5M3Q8NGP4 307 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 RASGRP4Q8TDF6 673 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPKOWQ92917 476 aaPredicted RBP eCLIP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ANGPTL4Q9BY76 406 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 B4GALT7Q9UBV7 327 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FBXL3Q9UKT7 428 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF835Q9Y2P0 537 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 RP1L1Q8IWN7 2480 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 A0A096LPK6 155 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 LOC285095A0A1B0GVY8 99 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 A0A1W2PQL4 384 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CLDN34H7C241 214 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TGFAP01135 160 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC19A1P41440 591 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 RAG2P55895 527 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ERVK-16P61578 105 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SH3BP2P78314 561 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACSF3Q4G176 576 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM102AQ5T9C2 384 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZDHHC24Q6UX98 284 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 MBOAT1Q6ZNC8 495 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 KIAA0907Q7Z7F0 614 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF101Q8IZC7 436 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FITM2Q8N6M3 262 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FBXO25Q8TCJ0 367 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OCEL1Q9H607 264 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 LHX3Q9UBR4 397 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ERRFI1Q9UJM3 462 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 POMT2Q9UKY4 750 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 C19orf53Q9UNZ5 99 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 H2AFB1P0C5Y9 115 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC35G4P0C7Q5 338 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CT45A6P0DMU7 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CT45A5P0DMU8 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CT45A7P0DMV0 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 PRF1P14222 555 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CT45A1Q5HYN5 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 NSUN5P2Q63ZY6 315 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms