RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SUSD5O60279 629 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 TXNDC12O95881 172 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 IGLV3-19P01714 112 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 POU3F4P49335 361 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 ADAM8P78325 824 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 ESCO2Q56NI9 601 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 GPR139Q6DWJ6 353 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 NHLRC1Q6VVB1 395 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 OTOSQ8NHW6 89 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 HGDQ93099 445 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 C4orf45Q96LM5 186 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 DCBLD2Q96PD2 775 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 TMEM14AQ9Y6G1 99 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 RNF215Q9Y6U7 377 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 TRAV36DV7A0A075B6V5 113 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 LILRA5A6NI73 299 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 PYCARD-AS1I3L0S3 204 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 SOX1O00570 391 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-201ENST00000320755 BGLAPP02818 100 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 ITGA5P08648 1049 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 CTLA4P16410 223 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 ARHGAP40Q5TG30 622 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 MAMDC2Q7Z304 686 aaPredicted RBP15.72■□□□□ 0.11
COL9A1-201ENST00000320755 KRT77Q7Z794 578 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 GPR119Q8TDV5 335 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 SORCS2Q96PQ0 1159 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 STEAP1Q9UHE8 339 aa15.72■□□□□ 0.11
COL9A1-201ENST00000320755 C10orf142B7Z368 130 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 GLSO94925 669 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-201ENST00000320755 WNT11O96014 354 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 FOLR1P15328 257 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 ABCD3P28288 659 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 GRK1Q15835 563 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 EMC4Q5J8M3 183 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 TMED7-TICAM2A0A0A6YYA0 188 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 NAP1L6A6NFF2 107 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 SULT1B1O43704 296 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 ZNF254O75437 659 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 ELAVL1Q15717 326 aaKnown RBP15.71■□□□□ 0.11
COL9A1-201ENST00000320755 RFPL4BQ6ZWI9 263 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 CCNL2Q96S94 520 aaPredicted RBP15.71■□□□□ 0.11
COL9A1-201ENST00000320755 SLC2A4RGQ9NR83 387 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 COPS7AQ9UBW8 275 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 TMED7Q9Y3B3 224 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 RTTNQ86VV8 2226 aa15.71■□□□□ 0.11
COL9A1-201ENST00000320755 PRSS37A4D1T9 235 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 G3V3Q6 166 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 TGM6O95932 706 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 HLA-DOBP13765 273 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 PGCP20142 388 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 FBLP22087 321 aaKnown RBP15.71■□□□□ 0.1
COL9A1-201ENST00000320755 CD27P26842 260 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 SLC6A8P48029 635 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 INSM1Q01101 510 aaPredicted RBP15.71■□□□□ 0.1
COL9A1-201ENST00000320755 DMWDQ09019 674 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 C19orf57Q0VDD7 668 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 C2orf76Q3KRA6 126 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 GLDNQ6ZMI3 551 aaPredicted RBP15.71■□□□□ 0.1
COL9A1-201ENST00000320755 SYT13Q7L8C5 426 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.71■□□□□ 0.1
COL9A1-201ENST00000320755 GINS4Q9BRT9 223 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 ZMAT3Q9HA38 289 aaKnown RBP15.71■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF304Q9HCX3 659 aa15.71■□□□□ 0.1
COL9A1-201ENST00000320755 A0A1B0GUH1 482 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 M0R233 179 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 CREBL2O60519 120 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-201ENST00000320755 ICMTO60725 284 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 GTF2F2P13984 249 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 IL11P20809 199 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 EGR3Q06889 387 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 RASGEF1BQ0VAM2 473 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 SLC17A1Q14916 467 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 UBXN2BQ14CS0 331 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 COL28A1Q2UY09 1125 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 NDUFAF7Q7L592 441 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 SLC29A4Q7RTT9 530 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 OR4C16Q8NGL9 310 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 OR1F2PQ96R84 312 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 ZNF587Q96SQ5 575 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-201ENST00000320755 NPAS1Q99742 590 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 WWTR1Q9GZV5 400 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 ATG5Q9H1Y0 275 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 MMACHCQ9Y4U1 282 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 DCDC2BA2VCK2 349 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 I3L521 148 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 SCO1O75880 301 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 RPL27P61353 136 aaKnown RBP15.7■□□□□ 0.1
COL9A1-201ENST00000320755 HSD11B2P80365 405 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 MFGE8Q08431 387 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-201ENST00000320755 PUDPQ08623 228 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 ELMOD3Q96FG2 381 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 MRPL22Q9NWU5 206 aaKnown RBP15.7■□□□□ 0.1
COL9A1-201ENST00000320755 CTSFQ9UBX1 484 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 CGGBP1Q9UFW8 167 aaPredicted RBP15.7■□□□□ 0.1
COL9A1-201ENST00000320755 ETV7Q9Y603 341 aa15.7■□□□□ 0.1
COL9A1-201ENST00000320755 TRBV5-7A0A0A0MS05 114 aa15.69■□□□□ 0.1
COL9A1-201ENST00000320755 FITM1A5D6W6 292 aa15.69■□□□□ 0.1
COL9A1-201ENST00000320755 XRCC3O43542 346 aa15.69■□□□□ 0.1
COL9A1-201ENST00000320755 PRAF2O60831 178 aa15.69■□□□□ 0.1
COL9A1-201ENST00000320755 CRYZL1O95825 349 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms