RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MFSD13AQ14CX5 517 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 NTRK2Q16620 822 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 CLPPQ16740 277 aaPredicted RBP6.8□□□□□ -1.32
IFT88-201ENST00000319980 Q499Y3 187 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 HES5Q5TA89 166 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 UTS2BQ765I0 119 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 ZNF676Q8N7Q3 588 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 OR51A4Q8NGJ6 313 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 OR10AC1Q8NH08 325 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 MNTQ99583 582 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 ZCCHC4Q9H5U6 513 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 TCF7L1Q9HCS4 588 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 RBFOX1Q9NWB1 397 aaKnown RBP6.8□□□□□ -1.32
IFT88-201ENST00000319980 SLC39A1Q9NY26 324 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 ABRACLQ9P1F3 81 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 NPIPA1Q9UND3 350 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 IGHV1-45A0A0A0MS14 117 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 EEF1E1O43324 174 aaKnown RBP6.8□□□□□ -1.32
IFT88-201ENST00000319980 ZNF208O43345 1280 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 IMPDH2P12268 514 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 MSX1P28360 303 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 CRABP1P29762 137 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 CLDN12P56749 244 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 MC2RQ01718 297 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 PLPPR5Q32ZL2 321 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 SLC18B1Q6NT16 456 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 ZNF544Q6NX49 715 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 MZT2BQ6NZ67 158 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 FAM198BQ6UWH4 519 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 TRILQ7L0X0 811 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 KRT74Q7RTS7 529 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 LGALS14Q8TCE9 139 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 RHBDD1Q8TEB9 315 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 RNF138Q8WVD3 245 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 TMEM106AQ96A25 262 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 MRGPRX4Q96LA9 322 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 EMC6Q9BV81 110 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 COMMD4Q9H0A8 199 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 B3GALT1Q9Y5Z6 326 aa6.8□□□□□ -1.32
IFT88-201ENST00000319980 COL5A1P20908 1838 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 LOC102723996A0A087X1L8 192 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 LIPT2A6NK58 231 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 OR4C45A6NMZ5 311 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 IFITM5A6NNB3 132 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MASP2O00187 686 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 PHYHO14832 338 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 RAD1O60671 282 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 SLC43A1O75387 559 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 LDOC1O95751 146 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 AVPR2P30518 371 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 NKX2-5P52952 324 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 BLVRAP53004 296 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 HSF1Q00613 529 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MRPL28Q13084 256 aaKnown RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 CBX3Q13185 183 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MYBPHQ13203 477 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 ZNF528Q3MIS6 628 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 RNASE12Q5GAN4 147 aaKnown RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 RSBN1Q5VWQ0 802 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 OR7E24Q6IFN5 339 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 PYHIN1Q6K0P9 492 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 WDFY1Q8IWB7 410 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 ZNF679Q8IYX0 411 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 PRSS35Q8N3Z0 413 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 WDSUB1Q8N9V3 476 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 ZBTB8BQ8NAP8 495 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 DTWD2Q8NBA8 298 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 RFT1Q96AA3 541 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 GFI1Q99684 422 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 CMKLR1Q99788 373 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 ARRDC1-AS1Q9H2J1 176 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 RNF121Q9H920 327 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 CHST11Q9NPF2 352 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 SPATA2Q9UM82 520 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 HS3ST3B1Q9Y662 390 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 CHCHD2Q9Y6H1 151 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 V9GY05 133 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 A0A1W2PNR3 127 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 TRABD2BA6NFA1 517 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 TMEM212A6NML5 194 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 AIPO00170 330 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 PDCD5O14737 125 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 IGHMP01871 453 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MAS1P04201 325 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MAPK3P27361 379 aaPredicted RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 SRP9P49458 86 aaKnown RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 DAP3P51398 398 aaKnown RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 EIF2B1Q14232 305 aaKnown RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 SLC17A1Q14916 467 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 SF3A2Q15428 464 aaKnown RBP6.79□□□□□ -1.32
IFT88-201ENST00000319980 WDR38Q5JTN6 314 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MTFR2Q6P444 385 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 STAC2Q6ZMT1 411 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 MDGA2Q7Z553 956 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 KRT77Q7Z794 578 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 GPAT4Q86UL3 456 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 LILRB2Q8N423 598 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 DNAAF1Q8NEP3 725 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 OR4K17Q8NGC6 315 aa6.79□□□□□ -1.32
IFT88-201ENST00000319980 OR2Y1Q8NGV0 311 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms