RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 WFDC6Q9BQY6 131 aa12.18□□□□□ -0.46
RPP40-201ENST00000319533 ZNF416Q9BWM5 594 aa12.18□□□□□ -0.46
RPP40-201ENST00000319533 ZNF346Q9UL40 294 aaKnown RBP12.18□□□□□ -0.46
RPP40-201ENST00000319533 GRIP1Q9Y3R0 1128 aa12.18□□□□□ -0.46
RPP40-201ENST00000319533 TRAV20A0A0B4J274 112 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 LRRN3E7EW58 273 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 NCR1O76036 304 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 MT-ATP6P00846 226 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 CD247P20963 164 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 CDH12P55289 794 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 GALK2Q01415 458 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 RAB39AQ14964 217 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 WDR88Q6ZMY6 472 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 USP43Q70EL4 1123 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 SKA3Q8IX90 412 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 OR2T12Q8NG77 320 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 GPR32P1Q8NGA4 272 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 OR5J2Q8NH18 312 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 OR51F2Q8NH61 342 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 OR6X1Q8NH79 312 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 VANGL1Q8TAA9 524 aaPredicted RBP12.17□□□□□ -0.46
RPP40-201ENST00000319533 CMTM5Q96DZ9 223 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 ZNF583Q96ND8 569 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 EFCAB1Q9HAE3 211 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 ARL8BQ9NVJ2 186 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 TREM2Q9NZC2 230 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 BAG5Q9UL15 447 aa12.17□□□□□ -0.46
RPP40-201ENST00000319533 DYSFO75923 2080 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 IGLV3-9A0A075B6K5 115 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 SLC22A23A1A5C7 686 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 TMEM89A2RUT3 159 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 EBAG9O00559 213 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 NAT2P11245 290 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 ZNF250P15622 560 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 CSNK1A1P48729 337 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 ZP4Q12836 540 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 C1orf229Q6ZS94 237 aaPredicted RBP12.16□□□□□ -0.46
RPP40-201ENST00000319533 OR6T1Q8NGN1 323 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 ZNF418Q8TF45 676 aaPredicted RBP12.16□□□□□ -0.46
RPP40-201ENST00000319533 HOPXQ9BPY8 73 aaPredicted RBP12.16□□□□□ -0.46
RPP40-201ENST00000319533 G6PC2Q9NQR9 355 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 GLTPQ9NZD2 209 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
RPP40-201ENST00000319533 A0A1W2PPW3 197 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 CPSF4LA6NMK7 179 aaKnown RBP12.15□□□□□ -0.46
RPP40-201ENST00000319533 C17orf100A8MU93 164 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 PPIHO43447 177 aaKnown RBP12.15□□□□□ -0.46
RPP40-201ENST00000319533 CHP2O43745 196 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 ENTPD5O75356 428 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 SNAP29O95721 258 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 PATE4P0C8F1 98 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 T-ENOLP0DO92 83 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 AHCYP23526 432 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 BIDP55957 195 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 HILS1P60008 231 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 MYBPC1Q00872 1141 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 NPTX1Q15818 432 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 LRRC23Q53EV4 343 aaPredicted RBP12.15□□□□□ -0.46
RPP40-201ENST00000319533 LRFN4Q6PJG9 635 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 DPPA2Q7Z7J5 298 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 TEX29Q8N6K0 151 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 C10orf53Q8N6V4 93 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 ADAMTS16Q8TE57 1224 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 FAM216AQ8WUB2 273 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 NARFLQ9H6Q4 476 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 LPAR2Q9HBW0 351 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 TMEM38BQ9NVV0 291 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 DUSP13Q9UII6 198 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
RPP40-201ENST00000319533 ELOVL7A1L3X0 281 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 TRAPPC13A5PLN9 417 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 SPRY1O43609 319 aaPredicted RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 LYPD3O95274 346 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 PNPP00491 289 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 ADORA3P0DMS8 318 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 OR8G3PP0DMU2 310 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 ANPEPP15144 967 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 CRYBB2P43320 205 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 MAGEB1P43366 347 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 NUDT2P50583 147 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 ZNF74Q16587 644 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 PCGF3Q3KNV8 242 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 NRN1LQ496H8 165 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 SHQ1Q6PI26 577 aaKnown RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 SLC35D2Q76EJ3 337 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 MICU2Q8IYU8 434 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 PAQR4Q8N4S7 273 aaPredicted RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 SLC30A7Q8NEW0 376 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 OR4D11Q8NGI4 311 aa12.14□□□□□ -0.47
RPP40-201ENST00000319533 ZMYND19Q96E35 227 aaPredicted RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 SLC25A44Q96H78 314 aaPredicted RBP12.14□□□□□ -0.47
RPP40-201ENST00000319533 MPP4Q96JB8 637 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms