RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PPP1CAP62136 330 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 LCN6P62502 163 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 ACTG1P63261 375 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 SKP2Q13309 424 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 GRM7Q14831 915 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 C11orf88Q6PI97 169 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 OIT3Q8WWZ8 545 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 FBXW5Q969U6 566 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 DGAT2Q96PD7 388 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 OR10A5Q9H207 317 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 POFUT1Q9H488 388 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 UPB1Q9UBR1 384 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 SPTBP11277 2137 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 BLACEA4D250 179 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 TEX46H3BTG2 121 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 SPDEFO95238 335 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 RENP00797 406 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 CD8AP01732 235 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 GDI1P31150 447 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 SRSF4Q08170 494 aaKnown RBP17.28■□□□□ 0.36
RTN4-201ENST00000317610 CD226Q15762 336 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 ZNF615Q8N8J6 731 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 ZSCAN1Q8NBB4 408 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 TMEM229BQ8NBD8 167 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 PXT1Q8NFP0 134 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 PHOSPHO2Q8TCD6 241 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 STK35Q8TDR2 534 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 DUSP19Q8WTR2 217 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 AMELYQ99218 206 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 KXD1Q9BQD3 176 aa17.28■□□□□ 0.36
RTN4-201ENST00000317610 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 MEIS3P1A6NDR6 274 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 OR4E1P0C645 316 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 MST1P26927 711 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 VEGFBP49765 207 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 TAS2R19P59542 299 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 ASPHD2Q6ICH7 369 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 C12orf45Q8N5I9 185 aaPredicted RBP17.27■□□□□ 0.36
RTN4-201ENST00000317610 OTOSQ8NHW6 89 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 ST8SIA2Q92186 375 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 DVL3Q92997 716 aaPredicted RBP17.27■□□□□ 0.36
RTN4-201ENST00000317610 SLC25A21Q9BQT8 299 aaPredicted RBP17.27■□□□□ 0.36
RTN4-201ENST00000317610 PBX4Q9BYU1 374 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 KCNK15Q9H427 330 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 RASL12Q9NYN1 266 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 EPHA6Q9UF33 1036 aa17.27■□□□□ 0.36
RTN4-201ENST00000317610 A0A0A6YYC8 382 aaPredicted RBP17.27■□□□□ 0.35
RTN4-201ENST00000317610 A0A1B0GW55 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 I3L1I5 382 aaPredicted RBP17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4L2P0CJ85 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4L3P0CJ86 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4L4P0CJ87 422 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4L5P0CJ88 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4L6P0CJ89 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4L7P0CJ90 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 ICAM2P13598 275 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 HNRNPA2B1P22626 353 aaKnown RBP17.27■□□□□ 0.35
RTN4-201ENST00000317610 AGTR1P30556 359 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 CD96P40200 585 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 RPS27P42677 84 aaKnown RBP17.27■□□□□ 0.35
RTN4-201ENST00000317610 CCINQ13939 588 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 KCNAB1Q14722 419 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 ODF4Q2M2E3 257 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 PRTGQ2VWP7 1150 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 TMEM184AQ6ZMB5 413 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 GATSQ8NAP1 163 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 TSEN15Q8WW01 171 aaKnown RBP17.27■□□□□ 0.35
RTN4-201ENST00000317610 SLC25A28Q96A46 364 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 OR8B4Q96RC9 309 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 SLC38A3Q99624 504 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 PRTFDC1Q9NRG1 225 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 DUX4Q9UBX2 424 aa17.27■□□□□ 0.35
RTN4-201ENST00000317610 MRPS33Q9Y291 106 aaKnown RBP17.27■□□□□ 0.35
RTN4-201ENST00000317610 A0A0D9SG52 128 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 A0A1B0GTI1 187 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 TMEM82A0PJX8 343 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 CLPSP04118 112 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 ETFDHQ16134 617 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 DEFB110Q30KQ9 67 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 MCATQ8IVS2 390 aaKnown RBP17.26■□□□□ 0.35
RTN4-201ENST00000317610 OR8S1Q8NH09 359 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 SEH1LQ96EE3 360 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 KTI12Q96EK9 354 aaPredicted RBP17.26■□□□□ 0.35
RTN4-201ENST00000317610 POTEKPQ9BYX7 375 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 BARX1Q9HBU1 254 aaPredicted RBP17.26■□□□□ 0.35
RTN4-201ENST00000317610 KCNG2Q9UJ96 466 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 CD37P11049 281 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 ST6GAL1P15907 406 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 SLC17A1Q14916 467 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 ARHGAP40Q5TG30 622 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 LRFN4Q6PJG9 635 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 LRRC69Q6ZNQ3 347 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 BADQ92934 168 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 ATG5Q9H1Y0 275 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 SYT4Q9H2B2 425 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 SEMA6CQ9H3T2 930 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 SCPEP1Q9HB40 452 aa17.26■□□□□ 0.35
RTN4-201ENST00000317610 H3BSH0 61 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 MYOGP15173 224 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 CCKBRP32239 447 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms