RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 SCN7AQ01118 1682 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 TOGARAM1Q9Y4F4 1720 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 LILRA5A6NI73 299 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 M0R082 166 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 IGLV3-27P01718 113 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 TGM4P49221 684 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 RAB13P51153 203 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 ARL16Q0P5N6 197 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 KRBOX4Q5JUW0 171 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 ELP2Q6IA86 826 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 RHOXF1Q8NHV9 184 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 PIGTQ969N2 578 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 FGGYQ96C11 551 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 C1QTNF6Q9BXI9 259 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 LAT2Q9GZY6 243 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 KCNJ16Q9NPI9 418 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 C1orf123Q9NWV4 160 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 USP54Q70EL1 1684 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 GFYI3L273 518 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 SPDEFO95238 335 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 ZGLP1P0C6A0 271 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 PTPN6P29350 595 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 CLN3Q13286 438 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 ARHGAP11BQ3KRB8 267 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 WDR88Q6ZMY6 472 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 PRELID1Q9Y255 219 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 COA3Q9Y2R0 106 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-201ENST00000316881 DOCK2Q92608 1830 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 FABP1P07148 127 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 TRA2AQ13595 282 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■■■□□ 15.8
TRIM25-201ENST00000316881 FAM53BQ14153 422 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 YIF1BQ5BJH7 314 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 NLRP8Q86W28 1048 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 BHLHE23Q8NDY6 225 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 UHRF2Q96PU4 802 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 SPACA1Q9HBV2 294 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 SEMA4GQ9NTN9 838 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 FBXO4Q9UKT5 387 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 NID1P14543 1247 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 BCKDHBP21953 392 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 CCL7P80098 99 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 IHHQ14623 411 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 SLC9A3R2Q15599 337 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 DOK3Q7L591 496 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 KLHDC8BQ8IXV7 354 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 PHYHIPQ92561 330 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 KCNJ15Q99712 375 aa13.12□□□□□ -0.31
TRIM25-201ENST00000316881 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 M0R1B8 84 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 MT-ND4P03905 459 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 THBS1P07996 1170 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 TNFSF8P32971 234 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 GNB2P62879 340 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 HBG1P69891 147 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 HBG2P69892 147 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 CCL4L1Q8NHW4 92 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 FRZBQ92765 325 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 RBMXL1Q96E39 390 aaKnown RBP13.11□□□□□ -0.31
TRIM25-201ENST00000316881 SMIM3Q9BZL3 60 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 QPCTLQ9NXS2 382 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 CLEC3BP05452 202 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 EVI2BP34910 448 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 TEKQ02763 1124 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 FAPQ12884 760 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 OR51A2Q8NGJ7 313 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 LINC01599Q8WXQ3 324 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 A0A087WZY1 265 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 FGF17O60258 216 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 OTUD1Q5VV17 481 aaPredicted RBP13.11□□□□□ -0.31
TRIM25-201ENST00000316881 CA13Q8N1Q1 262 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 CISD2Q8N5K1 135 aaKnown RBP13.11□□□□□ -0.31
TRIM25-201ENST00000316881 RASD2Q96D21 266 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 WWTR1Q9GZV5 400 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 CHST8Q9H2A9 424 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 TRAV17A0A0B4J275 112 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 A0A1W2PR48 441 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 SCAF4O95104 1147 aaKnown RBP13.11□□□□□ -0.31
TRIM25-201ENST00000316881 TGM6O95932 706 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 AGFG1P52594 562 aaKnown RBP13.11□□□□□ -0.31
TRIM25-201ENST00000316881 Q6ZNB5 142 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 SH2D5Q6ZV89 423 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 OR5AS1Q8N127 324 aa13.11□□□□□ -0.31
TRIM25-201ENST00000316881 HSBP1L1C9JCN9 74 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 F8W036 122 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 CLN5O75503 358 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 GABRG2P18507 467 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 AGBL4Q5VU57 503 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 TSLPQ969D9 159 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 WBP2Q969T9 261 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 WSB2Q9NYS7 404 aaPredicted RBP13.1□□□□□ -0.31
TRIM25-201ENST00000316881 SNX11Q9Y5W9 270 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
TRIM25-201ENST00000316881 ABCD4O14678 606 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms