RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 BOKQ9UMX3 212 aaPredicted RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 TRIP11Q15643 1979 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 TTLL8A6PVC2 850 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 G3V3Y1 287 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 ZNF254O75437 659 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 PDGFAP04085 211 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 OR10A3P58181 314 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 PMPCAQ10713 525 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 RUNX2Q13950 521 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 ZNF169Q14929 603 aaPredicted RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 MLF2Q15773 248 aaPredicted RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 PGAP1Q75T13 922 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 SMIM19Q96E16 107 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 DCBLD2Q96PD2 775 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 SLC25A31Q9H0C2 315 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 MMP17Q9ULZ9 603 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 TRIM64A6NGJ6 449 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 CPT2P23786 658 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 P2RX1P51575 399 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 RPS18P62269 152 aaKnown RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 BAK1Q16611 211 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 GLYR1Q49A26 553 aaPredicted RBP12.62□□□□□ -0.39
SPAST-201ENST00000315285 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 ARPC5LQ9BPX5 153 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 C1orf123Q9NWV4 160 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 A4GNTQ9UNA3 340 aa12.62□□□□□ -0.39
SPAST-201ENST00000315285 IFNA17P01571 189 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 IRF2P14316 349 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 AADACL4Q5VUY2 407 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 CPT1CQ8TCG5 803 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 SLAMF9Q96A28 289 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 PLA2G12AQ9BZM1 189 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 B3GNT2Q9NY97 397 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
SPAST-201ENST00000315285 LALBAP00709 142 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 PLA2G7Q13093 441 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 CLEC1AQ8NC01 280 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 C16orf52Q8NHV5 167 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 PPP1R35Q8TAP8 253 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 CTRCQ99895 268 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
SPAST-201ENST00000315285 IGHV3-20A0A0C4DH32 117 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 AIPO00170 330 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 STK17BO94768 372 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 OLFM2O95897 454 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 EIF4EP06730 217 aaKnown RBP12.61□□□□□ -0.39
SPAST-201ENST00000315285 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 MFGE8Q08431 387 aaPredicted RBP12.61□□□□□ -0.39
SPAST-201ENST00000315285 ACSM1Q08AH1 577 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 AGERQ15109 404 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 ZNF684Q5T5D7 378 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 BTLAQ7Z6A9 289 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 ISG20L2Q9H9L3 353 aaKnown RBP12.61□□□□□ -0.39
SPAST-201ENST00000315285 MCM3APO60318 1980 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 FITM1A5D6W6 292 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 PRAMEF25A6NGN4 478 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 EIF1BO60739 113 aaKnown RBP12.61□□□□□ -0.39
SPAST-201ENST00000315285 ALOX12BO75342 701 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 CER1O95813 267 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 SOD1P00441 154 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 ICAM2P13598 275 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 ACHEP22303 614 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 GCH1P30793 250 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 EPHA4P54764 986 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 ARG2P78540 354 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 BTG2P78543 158 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 EMC4Q5J8M3 183 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 CSF3RQ99062 836 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 PISDQ9UG56 409 aa12.61□□□□□ -0.39
SPAST-201ENST00000315285 TEX51A0A1B0GUA7 166 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 PPICP45877 212 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 KCNAB1Q14722 419 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 GLIPR1L1Q6UWM5 242 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 CCDC190Q86UF4 302 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 COMTD1Q86VU5 262 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 SUMF2Q8NBJ7 301 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 OR4D6Q8NGJ1 314 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 PSMF1Q92530 271 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 TMEM184BQ9Y519 407 aaPredicted RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 TNFSF12O43508 249 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 GPR137BO60478 399 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 AKR7A3O95154 331 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 LPLP06858 475 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 MAP2K6P52564 334 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 ACKR1Q16570 336 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 E9PI62 339 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 PMP2P02689 132 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 SNRNP70P08621 437 aaKnown RBP12.6□□□□□ -0.39
SPAST-201ENST00000315285 SLC2A1P11166 492 aa12.6□□□□□ -0.39
SPAST-201ENST00000315285 RPL18Q07020 188 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms