RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 BCL2L11O43521 198 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SEMA4FO95754 770 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RPS15P62841 145 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF791Q3KP31 576 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 C12orf73Q69YU5 71 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 NXF2Q9GZY0 626 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 POLE4Q9NR33 117 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 DVL2O14641 736 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 MAGEB4O15481 346 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 NSA2O95478 260 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CHRM5P08912 532 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 PSMG4Q5JS54 123 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RNF170Q96K19 258 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 S1PR5Q9H228 398 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 POLDIP2Q9Y2S7 368 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 IER3IP1Q9Y5U9 82 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ANKRD30BLA7E2S9 258 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SPDEFO95238 335 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RPS19P39019 145 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 MAGEB1P43366 347 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF85Q03923 595 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM41BQ5BJD5 291 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 FBXO48Q5FWF7 155 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 FAM74A1Q5RGS3 127 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 C8orf82Q6P1X6 216 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SEZ6L2Q6UXD5 910 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF551Q7Z340 670 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 KLHDC9Q8NEP7 349 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 OR1S1Q8NH92 325 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CPT1CQ8TCG5 803 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM204Q9BSN7 226 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 APOBEC3BQ9UH17 382 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ASB1Q9Y576 335 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM269A0A1B0GVZ9 245 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 M0QZK8 103 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 OIP5O43482 229 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 GGCTO75223 188 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CASP9P55211 416 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 LINC00596Q86U02 117 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 GCNT2Q8N0V5 402 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CPEB3Q8NE35 698 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 KCNK6Q9Y257 313 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 KIAA1671Q9BY89 1806 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1W2PQU0 124 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 K7EQM0 130 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 NAA10P41227 235 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 PCBP3P57721 371 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CCSAPQ6IQ19 270 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SIAH3Q8IW03 269 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 C15orf54Q8N8G6 183 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 MORN4Q8NDC4 146 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 FAM117AQ9C073 453 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 VNN3Q9NY84 501 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RPH3AQ9Y2J0 694 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CD300LBA8K4G0 201 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 LCATP04180 440 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF888P0CJ79 500 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CCL23P55773 120 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SEMG2Q02383 582 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 BAXQ07812 192 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 POM121L1PQ3SYA9 428 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 COL13A1Q5TAT6 717 aaPredicted RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 EXD3Q8N9H8 876 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 OR8S1Q8NH09 359 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 DPH1Q9BZG8 443 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SIRT7Q9NRC8 400 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RCE1Q9Y256 329 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 EXOGQ9Y2C4 368 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 GVINP1Q7Z2Y8 2422 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 MED12Q93074 2177 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RFPL4AA6NLU0 287 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 RFPL4AL1F8VTS6 287 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 CER1O95813 267 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 GABRB1P18505 474 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 MDH2P40926 338 aaKnown RBP8.12□□□□□ -1.11
COL6A5-202ENST00000312481 TFAP2EQ6VUC0 442 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 YIPF5Q969M3 257 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SPSB1Q96BD6 273 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 SGCZQ96LD1 299 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 PLEKHF2Q9H8W4 249 aa8.12□□□□□ -1.11
COL6A5-202ENST00000312481 PRSS38A1L453 326 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 GPR3P46089 330 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 OR8B8Q15620 311 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 MIDNQ504T8 468 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 GDF7Q7Z4P5 450 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 EXO1Q9UQ84 846 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 TMED3Q9Y3Q3 217 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 SOD1P00441 154 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 LIPAP38571 399 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 RPUSD4Q96CM3 377 aaKnown RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 GMPPAQ96IJ6 420 aaPredicted RBP8.11□□□□□ -1.11
COL6A5-202ENST00000312481 MRGPRX1Q96LB2 322 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM68Q96MH6 324 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 PKMYT1Q99640 499 aa8.11□□□□□ -1.11
COL6A5-202ENST00000312481 ABHD6Q9BV23 337 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms