RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 HBG2P69892 147 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SIRPAP78324 504 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 DCDP81605 110 aaKnown RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 CSRP2Q16527 193 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 BCDIN3DQ7Z5W3 292 aaKnown RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 NECAP1Q8NC96 275 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR8U1Q8NH10 309 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SFT2D1Q8WV19 159 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 NDRG3Q9UGV2 375 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 IGLV3-10A0A075B6K4 115 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 LMO7DNF2Z398 122 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 H0Y8X5 98 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 BET1O15155 118 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ZNF888P0CJ79 500 aaPredicted RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 CD82P27701 267 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR7A5Q15622 319 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SYPL1Q16563 259 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 RNLSQ5VYX0 342 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TMEM178AQ8NBL3 297 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR1S2Q8NGQ3 325 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ASB17Q8WXJ9 295 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR7D2Q96RA2 312 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 LIN7BQ9HAP6 207 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 PLSCR3Q9NRY6 295 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 IL17CQ9P0M4 197 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SLC23A2Q9UGH3 650 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CLEC2DQ9UHP7 191 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 KDM4EB2RXH2 506 aaPredicted RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 J3QR89 54 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SLC16A6O15403 523 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 B4GALT3O60512 393 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ATP1B1P05026 303 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ZNF28P17035 718 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 AADACL3Q5VUY0 350 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TBPL2Q6SJ96 375 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
VPS41-202ENST00000310301 SMIM15Q7Z3B0 74 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ZNF561Q8N587 486 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 LFNGQ8NES3 379 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR13C2Q8NGS9 318 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 OR2G3Q8NGZ4 309 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 DIO2Q92813 273 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 NEIL2Q969S2 332 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 EGLN2Q96KS0 407 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SEMA4CQ9C0C4 833 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ARV1Q9H2C2 271 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 MED16Q9Y2X0 877 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 V9GYS6 101 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 A0A0U1RQS6 177 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ZNF724A8MTY0 619 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CYB5BO43169 146 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 UBL4AP11441 157 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CR2P20023 1033 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 CD80P33681 288 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SFTPDP35247 375 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SLC6A8P48029 635 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 NSDHLQ15738 373 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TAF9Q16594 264 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 C4orf17Q53FE4 359 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 RNF175Q8N4F7 328 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ZNF596Q8TC21 504 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SLC25A46Q96AG3 418 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 SGPP1Q9BX95 441 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 TUBB1Q9H4B7 451 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 ANKRD19PQ9H560 264 aa7.54□□□□□ -1.2
VPS41-202ENST00000310301 MYH15Q9Y2K3 1946 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 TRDV1A0A1B0GX56 115 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 C2orf72A6NCS6 295 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 TMEM212A6NML5 194 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ADAM23O75077 832 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 FABP1P07148 127 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PTBP1P26599 531 aaKnown RBP eCLIP7.53□□□□□ -1.21e-6■■■□□ 17.6
VPS41-202ENST00000310301 EPHA8P29322 1005 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 CCNJQ5T5M9 372 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 SIGIRRQ6IA17 410 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 CORO6Q6QEF8 472 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 MOB3CQ70IA8 216 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ADIPOR2Q86V24 386 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ZNF761Q86XN6 746 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 PRR22Q8IZ63 422 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 NLGN4YQ8NFZ3 816 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR4C5Q8NGB2 326 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR56B1Q8NGI3 324 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR6M1Q8NGM8 313 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR5B2Q96R09 309 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PLEK2Q9NYT0 353 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 MYH11P35749 1972 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PAPLNO95428 1278 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 AADACP22760 399 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 VASPP50552 380 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 UBE2NP61088 152 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 SNTB1Q13884 538 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 MELKQ14680 651 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 RAB35Q15286 201 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 KIAA0907Q7Z7F0 614 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 RELL2Q8NC24 303 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 ZNF680Q8NEM1 530 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms