RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 UCHL1P09936 223 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 PTGS2P35354 604 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 DNASE1L1P49184 302 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 ADAM8P78325 824 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 SLC35A1P78382 337 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 FMODQ06828 376 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 ALKBH1Q13686 389 aaKnown RBP19.02■□□□□ 0.64
ATG4D-201ENST00000309469 ZNF239Q16600 458 aaKnown RBP19.02■□□□□ 0.64
ATG4D-201ENST00000309469 YIF1BQ5BJH7 314 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 IDNKQ5T6J7 187 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 RAET1LQ5VY80 246 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 HBMQ6B0K9 141 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 SLC18B1Q6NT16 456 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 LRRC69Q6ZNQ3 347 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 TRILQ7L0X0 811 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 THOC3Q96J01 351 aaKnown RBP19.02■□□□□ 0.64
ATG4D-201ENST00000309469 OR14A2Q96R54 314 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 EMC6Q9BV81 110 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 FRRS1LQ9P0K9 344 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 SDK2Q58EX2 2172 aa19.02■□□□□ 0.64
ATG4D-201ENST00000309469 FABP12A6NFH5 140 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 HSPB2A8KAH6 182 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 HPGDSO60760 199 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 DEFA1P59665 94 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 DEFA3P59666 94 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF79Q15937 498 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 HSPB2Q16082 182 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 MEP1BQ16820 701 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 TMEM225Q6GV28 225 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 FAM131AQ6UXB0 335 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 BEST3Q8N1M1 668 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 PHYHIPQ92561 330 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 OR8B4Q96RC9 309 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 TTYH2Q9BSA4 534 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 KLHL13Q9P2N7 655 aa19.02■□□□□ 0.63
ATG4D-201ENST00000309469 OR2M5A3KFT3 312 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF814B7Z6K7 855 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 STMND1H3BQB6 276 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 KHDRBS3O75525 346 aaKnown RBP19.01■□□□□ 0.63
ATG4D-201ENST00000309469 MPZL1O95297 269 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 PTTG1O95997 202 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 HNRNPCP07910 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
ATG4D-201ENST00000309469 OR10A3P58181 314 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 CDC20Q12834 499 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 JMJD6Q6NYC1 403 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-201ENST00000309469 OR8H2Q8N162 312 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 NSMAFQ92636 917 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 OXGR1Q96P68 337 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 SRRQ9GZT4 340 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 C14orf119Q9NWQ9 140 aa19.01■□□□□ 0.63
ATG4D-201ENST00000309469 A0A0G2JK05 382 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 A0A0G2JMM0 328 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 A0A1W2PPB8 328 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 A0A1W2PRS3 328 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 KIR3DP1A8MWS1 328 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 PRR33A8MZF0 331 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 LRP3O75074 770 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 PMS2P2O95744 297 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF17P17021 662 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 CYB561P49447 251 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 STPG1Q5TH74 334 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 SFXN4Q6P4A7 337 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 GPAT4Q86UL3 456 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF227Q86WZ6 799 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF454Q8N9F8 522 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 SLC26A10Q8NG04 563 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 RGP1Q92546 391 aaPredicted RBP19■□□□□ 0.63
ATG4D-201ENST00000309469 KCTD12Q96CX2 325 aaKnown RBP19■□□□□ 0.63
ATG4D-201ENST00000309469 MRPL13Q9BYD1 178 aaKnown RBP19■□□□□ 0.63
ATG4D-201ENST00000309469 B3GNT4Q9C0J1 378 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 ELOVL3Q9HB03 270 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 STMN3Q9NZ72 180 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 IGKV1D-43A0A0B4J1Z2 117 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 LOC102725191A0A1B0GVB3 256 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 AQP7P3A6NL99 342 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 RAB3BP20337 219 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 RANBP1P43487 201 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 SLC17A1Q14916 467 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 HSD17B12Q53GQ0 312 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 XKRXQ6PP77 449 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 DEFB124Q8NES8 71 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 OR2G2Q8NGZ5 317 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 OR5AK2Q8NH90 309 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 ADAMTS17Q8TE56 1095 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 RBP7Q96R05 134 aa19■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF879B4DU55 563 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 TRAF3IP2O43734 574 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF823P16415 610 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 OC90Q02509 493 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-201ENST00000309469 ROM1Q03395 351 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 EIF2B1Q14232 305 aaKnown RBP18.99■□□□□ 0.63
ATG4D-201ENST00000309469 LRRN1Q6UXK5 716 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 ZNF679Q8IYX0 411 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 HTRA1Q92743 480 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 PIGQQ9BRB3 760 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 MFRPQ9BY79 579 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 NOX4Q9NPH5 578 aa18.99■□□□□ 0.63
ATG4D-201ENST00000309469 A0A087WV48 116 aa18.98■□□□□ 0.63
ATG4D-201ENST00000309469 A0A1B0GTH9 108 aa18.98■□□□□ 0.63
ATG4D-201ENST00000309469 RAMP1O60894 148 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms