RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RCBTB2O95199 551 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 AK1P00568 194 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 LALBAP00709 142 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MT-ND5P03915 603 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 UMODP07911 640 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 FREM3P0C091 2139 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SLC35G4P0C7Q5 338 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SAGP10523 405 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ANXA3P12429 323 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PVRP15151 417 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GYPEP15421 78 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 UGT2B7P16662 529 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 POLR2CP19387 275 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ELK1P19419 428 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 C4BPBP20851 252 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PAICSP22234 425 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 HIST1H1TP22492 207 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 AHCYP23526 432 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ATP5A1P25705 553 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 STOMP27105 288 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 HTR2BP41595 481 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 AVPR1BP47901 424 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GABRA4P48169 554 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PITPNBP48739 271 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 TGM4P49221 684 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 RAB28P51157 221 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MMP15P51511 669 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ACTC1P68032 377 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ACTA1P68133 377 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 HOXC5Q00444 222 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ACY1Q03154 408 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GALEQ14376 348 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GPR176Q14439 515 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 P2RY14Q15391 338 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ZSWIM7Q19AV6 140 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 FAM214AQ32MH5 1076 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GAGE13Q4V321 117 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SLC22A10Q63ZE4 541 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SP5Q6BEB4 398 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SIGIRRQ6IA17 410 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 LAMTOR1Q6IAA8 161 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ABHD17CQ6PCB6 329 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ZCCHC12Q6PEW1 402 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SMARCD3Q6STE5 483 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 IGFL3Q6UXB1 125 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 IDO2Q6ZQW0 420 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 Q6ZS92 163 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PLEKHM3Q6ZWE6 761 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 TMPRSS11FQ6ZWK6 438 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MEPCEQ7L2J0 689 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PPP1R32Q7Z5V6 425 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 FGD2Q7Z6J4 655 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PXKQ7Z7A4 578 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 LUZP2Q86TE4 346 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 COMTD1Q86VU5 262 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 KMT5CQ86Y97 462 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 CCDC28AQ8IWP9 274 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 LNX2Q8N448 690 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 C9orf62Q8N4C0 152 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 OR2A1Q8NGT9 310 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 FLVCR1-AS1Q8TAF5 88 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SNAPC3Q92966 411 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 UCN3Q969E3 161 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 UPRTQ96BW1 309 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MS4A6EQ96DS6 147 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ELP4Q96EB1 424 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MRPL48Q96GC5 212 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SLC41A3Q96GZ6 507 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SENP5Q96HI0 755 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 C5orf34Q96MH7 638 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 HS6ST2Q96MM7 605 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 PRAP1Q96NZ9 151 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 IL17FQ96PD4 163 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 OR7D2Q96RA2 312 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SECISBP2Q96T21 854 aaKnown RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 CD180Q99467 661 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MCHR1Q99705 422 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 DHRS9Q9BPW9 319 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 WFDC6Q9BQY6 131 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 THAP7Q9BT49 309 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MRI1Q9BV20 369 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MED28Q9H204 178 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 UBQLN3Q9H347 655 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 DPAGT1Q9H3H5 408 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 EGLN3Q9H6Z9 239 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 FAM60AQ9NP50 221 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 B3GAT2Q9NPZ5 323 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 POLE3Q9NRF9 147 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 CMC2Q9NRP2 79 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 SLC22A11Q9NSA0 550 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 MCUBQ9NWR8 336 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 TEX10Q9NXF1 929 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ABRACLQ9P1F3 81 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 EXTL2Q9UBQ6 330 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 ELF5Q9UKW6 265 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-201ENST00000308987 POMT2Q9UKY4 750 aa4.41□□□□□ -1.7
CKS1B-201ENST00000308987 YARS2Q9Y2Z4 477 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms