RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 SEC22CQ9BRL7 303 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SHROOM3Q8TF72 1996 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 PLSCR5A0PG75 271 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 FBXO24O75426 580 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SOX18P35713 384 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 GOT1L1Q8NHS2 421 aaPredicted RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 LOC100289279A0A1B0GTE1 492 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ARRDC5A6NEK1 342 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SRFP11831 508 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 RPL18Q07020 188 aaKnown RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SF3B4Q15427 424 aaKnown RBP eCLIP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 PRTGQ2VWP7 1150 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 GDPD3Q7L5L3 318 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ADGRE4PQ86SQ3 457 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 OR13C5Q8NGS8 318 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 PRDM7Q9NQW5 492 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ZNF346Q9UL40 294 aaKnown RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 LOXHD1Q8IVV2 1947 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SLC22A23A1A5C7 686 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ICOSLGO75144 302 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 CBX7O95931 251 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 CISD3P0C7P0 127 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 UBBP0CG47 229 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 FABP5Q01469 135 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ZNF529Q6P280 563 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ARIH2OSQ8N7S6 290 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 MICU1Q9BPX6 476 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SDHAP31040 664 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 IL2RGP31785 369 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 MAP2K6P52564 334 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 RAE1P78406 368 aaKnown RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ANGPTL5Q86XS5 388 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 FAM71CQ8NEG0 241 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 STK35Q8TDR2 534 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 RNF128Q8TEB7 428 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 OCEL1Q9H607 264 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 NPAP1Q9NZP6 1156 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SPTY2D1-AS1A0A0U1RR47 76 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 YKT6O15498 198 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 NFYAP23511 347 aaPredicted RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 APOBEC1P41238 236 aaKnown RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 TMEM81Q6P7N7 255 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 GLIPR1L1Q6UWM5 242 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 RDH10Q8IZV5 341 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 SLC25A43Q8WUT9 341 aaPredicted RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 TMEM68Q96MH6 324 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 OR5B12Q96R08 314 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 EMC7Q9NPA0 242 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 NUP214P35658 2090 aaPredicted RBP9.06□□□□□ -0.96
TMOD3-201ENST00000308580 H0YIG0 161 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ABOP16442 354 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 CPT2P23786 658 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 TGM4P49221 684 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 IKZF1Q13422 519 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ACTBL2Q562R1 376 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 ZNF793Q6ZN11 406 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 YIPF6Q96EC8 236 aa9.06□□□□□ -0.96
TMOD3-201ENST00000308580 KCNE1BA0A087WTH5 132 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 GABRG2P18507 467 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 CYB561P49447 251 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 ERVK-16P61578 105 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 FAPQ12884 760 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 CLVS2Q5SYC1 327 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 OTPQ5XKR4 325 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 GCDHQ92947 438 aaPredicted RBP9.05□□□□□ -0.96
TMOD3-201ENST00000308580 ARL5BQ96KC2 179 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 TCEAL2Q9H3H9 227 aaPredicted RBP9.05□□□□□ -0.96
TMOD3-201ENST00000308580 A0A1W2PNR3 127 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 HSPB6O14558 160 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 GPR171O14626 319 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 PRAMEF4O60810 478 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 EMDP50402 254 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 HSF1Q00613 529 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 HTR4Q13639 388 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 KIRREL2Q6UWL6 708 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 FBXW12Q6X9E4 464 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 OVCH1Q7RTY7 1134 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 NKAIN3Q8N8D7 197 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 AMER3Q8N944 861 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 PLA2G12AQ9BZM1 189 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 POMT2Q9UKY4 750 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 LOC107986453A0A1B0GWG9 222 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 GPR85P60893 370 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 FAM53BQ14153 422 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 COMTD1Q86VU5 262 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 SIRT6Q8N6T7 355 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 GJC3Q8NFK1 279 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 OR4D6Q8NGJ1 314 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 OR5H6Q8NGV6 325 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
TMOD3-201ENST00000308580 KCNJ16Q9NPI9 418 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 C2CD4DB7Z1M9 353 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 SIX6O95475 246 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 PMPCAQ10713 525 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 TPBGQ13641 420 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 CORO6Q6QEF8 472 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 USP51Q70EK9 711 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 DCBLD2Q96PD2 775 aa9.05□□□□□ -0.96
TMOD3-201ENST00000308580 LAT2Q9GZY6 243 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms